Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Trim42Q9D2H5 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC14.07□□□□□ -0.16
Trim42Q9D2H5 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trim42Q9D2H5 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Trim42Q9D2H5 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim42Q9D2H5 Gm10459-201ENSMUST00000202708 1155 ntBASIC14.07□□□□□ -0.16
Trim42Q9D2H5 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC14.07□□□□□ -0.16
Trim42Q9D2H5 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim42Q9D2H5 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trim42Q9D2H5 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim42Q9D2H5 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trim42Q9D2H5 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim42Q9D2H5 AC119177.1-201ENSMUST00000227647 1332 ntBASIC14.07□□□□□ -0.16
Trim42Q9D2H5 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trim42Q9D2H5 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim42Q9D2H5 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trim42Q9D2H5 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Trim42Q9D2H5 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim42Q9D2H5 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim42Q9D2H5 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC14.07□□□□□ -0.16
Trim42Q9D2H5 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Trim42Q9D2H5 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim42Q9D2H5 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC14.07□□□□□ -0.16
Trim42Q9D2H5 Tcf21-202ENSMUST00000218002 1788 ntBASIC14.06□□□□□ -0.16
Trim42Q9D2H5 Gm5639-201ENSMUST00000122305 2403 ntBASIC14.06□□□□□ -0.16
Trim42Q9D2H5 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim42Q9D2H5 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Trim42Q9D2H5 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Trim42Q9D2H5 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim42Q9D2H5 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim42Q9D2H5 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC14.06□□□□□ -0.16
Trim42Q9D2H5 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trim42Q9D2H5 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim42Q9D2H5 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim42Q9D2H5 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trim42Q9D2H5 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim42Q9D2H5 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim42Q9D2H5 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trim42Q9D2H5 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim42Q9D2H5 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim42Q9D2H5 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim42Q9D2H5 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC14.06□□□□□ -0.16
Trim42Q9D2H5 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC14.06□□□□□ -0.16
Trim42Q9D2H5 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trim42Q9D2H5 Gm18041-201ENSMUST00000218210 618 ntBASIC14.06□□□□□ -0.16
Trim42Q9D2H5 AC102291.3-201ENSMUST00000226566 405 ntBASIC14.06□□□□□ -0.16
Trim42Q9D2H5 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim42Q9D2H5 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim42Q9D2H5 Gm15889-202ENSMUST00000212669 2443 ntBASIC14.06□□□□□ -0.16
Trim42Q9D2H5 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim42Q9D2H5 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trim42Q9D2H5 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trim42Q9D2H5 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim42Q9D2H5 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim42Q9D2H5 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim42Q9D2H5 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim42Q9D2H5 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC14.06□□□□□ -0.16
Trim42Q9D2H5 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Trim42Q9D2H5 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim42Q9D2H5 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim42Q9D2H5 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC14.05□□□□□ -0.16
Trim42Q9D2H5 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trim42Q9D2H5 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim42Q9D2H5 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trim42Q9D2H5 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC14.05□□□□□ -0.16
Trim42Q9D2H5 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim42Q9D2H5 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC14.05□□□□□ -0.16
Trim42Q9D2H5 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim42Q9D2H5 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Trim42Q9D2H5 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Trim42Q9D2H5 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim42Q9D2H5 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trim42Q9D2H5 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC14.05□□□□□ -0.16
Trim42Q9D2H5 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC14.05□□□□□ -0.16
Trim42Q9D2H5 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trim42Q9D2H5 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC14.05□□□□□ -0.16
Trim42Q9D2H5 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC14.05□□□□□ -0.16
Trim42Q9D2H5 AC147366.1-201ENSMUST00000227671 852 ntBASIC14.05□□□□□ -0.16
Trim42Q9D2H5 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim42Q9D2H5 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim42Q9D2H5 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim42Q9D2H5 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
Trim42Q9D2H5 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC14.05□□□□□ -0.16
Trim42Q9D2H5 Gm5366-201ENSMUST00000215494 1338 ntBASIC14.05□□□□□ -0.16
Trim42Q9D2H5 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim42Q9D2H5 AC121801.1-201ENSMUST00000225363 1899 ntBASIC14.05□□□□□ -0.16
Trim42Q9D2H5 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim42Q9D2H5 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trim42Q9D2H5 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim42Q9D2H5 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim42Q9D2H5 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trim42Q9D2H5 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC14.05□□□□□ -0.16
Trim42Q9D2H5 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Trim42Q9D2H5 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Trim42Q9D2H5 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trim42Q9D2H5 Il17rd-203ENSMUST00000225146 3366 ntBASIC14.05□□□□□ -0.16
Trim42Q9D2H5 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim42Q9D2H5 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trim42Q9D2H5 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trim42Q9D2H5 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms