Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Celf4-206ENSMUST00000224553 1729 ntBASIC12.34□□□□□ -0.43
Scrt1Q99M85 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Scrt1Q99M85 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Scrt1Q99M85 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Scrt1Q99M85 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Scrt1Q99M85 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Scrt1Q99M85 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC12.33□□□□□ -0.44
Scrt1Q99M85 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Scrt1Q99M85 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scrt1Q99M85 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scrt1Q99M85 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scrt1Q99M85 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scrt1Q99M85 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC12.33□□□□□ -0.44
Scrt1Q99M85 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scrt1Q99M85 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scrt1Q99M85 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scrt1Q99M85 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Scrt1Q99M85 Gm5303-201ENSMUST00000117943 1252 ntBASIC12.33□□□□□ -0.44
Scrt1Q99M85 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC12.33□□□□□ -0.44
Scrt1Q99M85 Mir1982-201ENSMUST00000157368 74 ntBASIC12.33□□□□□ -0.44
Scrt1Q99M85 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Scrt1Q99M85 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC12.33□□□□□ -0.44
Scrt1Q99M85 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC12.33□□□□□ -0.44
Scrt1Q99M85 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scrt1Q99M85 Gm5049-201ENSMUST00000195878 1590 ntBASIC12.33□□□□□ -0.44
Scrt1Q99M85 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scrt1Q99M85 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC12.33□□□□□ -0.44
Scrt1Q99M85 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scrt1Q99M85 Gm45003-201ENSMUST00000205875 2158 ntBASIC12.33□□□□□ -0.44
Scrt1Q99M85 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scrt1Q99M85 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Scrt1Q99M85 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scrt1Q99M85 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC12.33□□□□□ -0.44
Scrt1Q99M85 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scrt1Q99M85 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scrt1Q99M85 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Scrt1Q99M85 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scrt1Q99M85 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scrt1Q99M85 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Scrt1Q99M85 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scrt1Q99M85 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC12.32□□□□□ -0.44
Scrt1Q99M85 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scrt1Q99M85 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC12.32□□□□□ -0.44
Scrt1Q99M85 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Scrt1Q99M85 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scrt1Q99M85 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC12.32□□□□□ -0.44
Scrt1Q99M85 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Scrt1Q99M85 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scrt1Q99M85 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scrt1Q99M85 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scrt1Q99M85 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scrt1Q99M85 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
Scrt1Q99M85 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scrt1Q99M85 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scrt1Q99M85 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Scrt1Q99M85 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC12.32□□□□□ -0.44
Scrt1Q99M85 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Scrt1Q99M85 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Scrt1Q99M85 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scrt1Q99M85 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
Scrt1Q99M85 Ldha-ps-201ENSMUST00000119390 995 ntBASIC12.32□□□□□ -0.44
Scrt1Q99M85 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC12.32□□□□□ -0.44
Scrt1Q99M85 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Scrt1Q99M85 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC12.32□□□□□ -0.44
Scrt1Q99M85 Gm9002-201ENSMUST00000178437 499 ntBASIC12.32□□□□□ -0.44
Scrt1Q99M85 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC12.32□□□□□ -0.44
Scrt1Q99M85 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC12.32□□□□□ -0.44
Scrt1Q99M85 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Scrt1Q99M85 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Scrt1Q99M85 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scrt1Q99M85 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Scrt1Q99M85 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Scrt1Q99M85 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Scrt1Q99M85 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC12.32□□□□□ -0.44
Scrt1Q99M85 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Scrt1Q99M85 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Scrt1Q99M85 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scrt1Q99M85 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scrt1Q99M85 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scrt1Q99M85 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Scrt1Q99M85 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Scrt1Q99M85 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scrt1Q99M85 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Scrt1Q99M85 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC12.31□□□□□ -0.44
Scrt1Q99M85 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Scrt1Q99M85 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Scrt1Q99M85 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC12.31□□□□□ -0.44
Scrt1Q99M85 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Scrt1Q99M85 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Scrt1Q99M85 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Scrt1Q99M85 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Scrt1Q99M85 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Scrt1Q99M85 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Scrt1Q99M85 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC12.31□□□□□ -0.44
Scrt1Q99M85 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Scrt1Q99M85 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Scrt1Q99M85 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Scrt1Q99M85 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Scrt1Q99M85 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC12.31□□□□□ -0.44
Scrt1Q99M85 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms