Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb6Q91XZ4 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb6Q91XZ4 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb6Q91XZ4 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC14.43□□□□□ -0.1
Pcdhb6Q91XZ4 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb6Q91XZ4 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC14.43□□□□□ -0.1
Pcdhb6Q91XZ4 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb6Q91XZ4 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC14.43□□□□□ -0.1
Pcdhb6Q91XZ4 Gm15460-201ENSMUST00000118147 391 ntBASIC14.43□□□□□ -0.1
Pcdhb6Q91XZ4 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
Pcdhb6Q91XZ4 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb6Q91XZ4 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb6Q91XZ4 Gm38294-201ENSMUST00000192831 381 ntBASIC14.43□□□□□ -0.1
Pcdhb6Q91XZ4 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Pcdhb6Q91XZ4 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
Pcdhb6Q91XZ4 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Pcdhb6Q91XZ4 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb6Q91XZ4 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb6Q91XZ4 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb6Q91XZ4 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC14.43□□□□□ -0.1
Pcdhb6Q91XZ4 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb6Q91XZ4 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb6Q91XZ4 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb6Q91XZ4 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb6Q91XZ4 AC114543.1-201ENSMUST00000226451 1558 ntBASIC14.43□□□□□ -0.1
Pcdhb6Q91XZ4 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb6Q91XZ4 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb6Q91XZ4 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhb6Q91XZ4 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhb6Q91XZ4 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhb6Q91XZ4 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhb6Q91XZ4 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhb6Q91XZ4 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhb6Q91XZ4 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Pcdhb6Q91XZ4 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC14.42□□□□□ -0.1
Pcdhb6Q91XZ4 Gm27680-201ENSMUST00000184192 160 ntBASIC14.42□□□□□ -0.1
Pcdhb6Q91XZ4 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC14.42□□□□□ -0.1
Pcdhb6Q91XZ4 Gm9229-201ENSMUST00000222777 126 ntBASIC14.42□□□□□ -0.1
Pcdhb6Q91XZ4 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhb6Q91XZ4 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Pcdhb6Q91XZ4 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhb6Q91XZ4 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC14.42□□□□□ -0.1
Pcdhb6Q91XZ4 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhb6Q91XZ4 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhb6Q91XZ4 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhb6Q91XZ4 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhb6Q91XZ4 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Pcdhb6Q91XZ4 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhb6Q91XZ4 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhb6Q91XZ4 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhb6Q91XZ4 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhb6Q91XZ4 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhb6Q91XZ4 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhb6Q91XZ4 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhb6Q91XZ4 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhb6Q91XZ4 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC14.41□□□□□ -0.1
Pcdhb6Q91XZ4 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC14.41□□□□□ -0.1
Pcdhb6Q91XZ4 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC14.41□□□□□ -0.1
Pcdhb6Q91XZ4 Gm13616-201ENSMUST00000120600 222 ntBASIC14.41□□□□□ -0.1
Pcdhb6Q91XZ4 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhb6Q91XZ4 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC14.41□□□□□ -0.1
Pcdhb6Q91XZ4 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhb6Q91XZ4 Gm3809-201ENSMUST00000180973 1006 ntBASIC14.41□□□□□ -0.1
Pcdhb6Q91XZ4 Gm27321-201ENSMUST00000185021 205 ntBASIC14.41□□□□□ -0.1
Pcdhb6Q91XZ4 Gm29741-201ENSMUST00000192667 421 ntBASIC14.41□□□□□ -0.1
Pcdhb6Q91XZ4 AC153872.1-201ENSMUST00000199539 128 ntBASIC14.41□□□□□ -0.1
Pcdhb6Q91XZ4 Gm46209-201ENSMUST00000217912 553 ntBASIC14.41□□□□□ -0.1
Pcdhb6Q91XZ4 AC149294.4-201ENSMUST00000227870 882 ntBASIC14.41□□□□□ -0.1
Pcdhb6Q91XZ4 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhb6Q91XZ4 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhb6Q91XZ4 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC14.41□□□□□ -0.1
Pcdhb6Q91XZ4 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhb6Q91XZ4 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhb6Q91XZ4 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Pcdhb6Q91XZ4 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhb6Q91XZ4 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhb6Q91XZ4 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhb6Q91XZ4 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhb6Q91XZ4 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhb6Q91XZ4 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC14.41□□□□□ -0.1
Pcdhb6Q91XZ4 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhb6Q91XZ4 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhb6Q91XZ4 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhb6Q91XZ4 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhb6Q91XZ4 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC14.41□□□□□ -0.1
Pcdhb6Q91XZ4 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Pcdhb6Q91XZ4 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhb6Q91XZ4 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC14.4□□□□□ -0.1
Pcdhb6Q91XZ4 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
Pcdhb6Q91XZ4 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhb6Q91XZ4 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Pcdhb6Q91XZ4 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhb6Q91XZ4 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC14.4□□□□□ -0.1
Pcdhb6Q91XZ4 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhb6Q91XZ4 Gm42769-201ENSMUST00000198576 1659 ntBASIC14.4□□□□□ -0.1
Pcdhb6Q91XZ4 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Pcdhb6Q91XZ4 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhb6Q91XZ4 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
Pcdhb6Q91XZ4 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhb6Q91XZ4 Gm7820-201ENSMUST00000121012 1052 ntBASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms