Protein–RNA interactions for Protein: Q8VCZ8

Rpusd1, RNA pseudouridylate synthase domain-containing protein 1, mousemouse

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpusd1Q8VCZ8 Gm13859-201ENSMUST00000119936 1423 ntBASIC13.34□□□□□ -0.27
Rpusd1Q8VCZ8 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC13.34□□□□□ -0.27
Rpusd1Q8VCZ8 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rpusd1Q8VCZ8 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC13.34□□□□□ -0.27
Rpusd1Q8VCZ8 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rpusd1Q8VCZ8 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Rpusd1Q8VCZ8 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rpusd1Q8VCZ8 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rpusd1Q8VCZ8 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rpusd1Q8VCZ8 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rpusd1Q8VCZ8 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC13.34□□□□□ -0.27
Rpusd1Q8VCZ8 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rpusd1Q8VCZ8 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rpusd1Q8VCZ8 AC168058.1-201ENSMUST00000219521 2282 ntBASIC13.34□□□□□ -0.27
Rpusd1Q8VCZ8 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rpusd1Q8VCZ8 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rpusd1Q8VCZ8 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rpusd1Q8VCZ8 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rpusd1Q8VCZ8 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rpusd1Q8VCZ8 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC13.34□□□□□ -0.27
Rpusd1Q8VCZ8 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rpusd1Q8VCZ8 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rpusd1Q8VCZ8 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rpusd1Q8VCZ8 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rpusd1Q8VCZ8 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rpusd1Q8VCZ8 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rpusd1Q8VCZ8 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Rpusd1Q8VCZ8 Gm21038-201ENSMUST00000222205 1383 ntBASIC13.33□□□□□ -0.27
Rpusd1Q8VCZ8 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rpusd1Q8VCZ8 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rpusd1Q8VCZ8 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rpusd1Q8VCZ8 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rpusd1Q8VCZ8 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rpusd1Q8VCZ8 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rpusd1Q8VCZ8 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Rpusd1Q8VCZ8 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rpusd1Q8VCZ8 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rpusd1Q8VCZ8 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rpusd1Q8VCZ8 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rpusd1Q8VCZ8 Gm12928-201ENSMUST00000117115 573 ntBASIC13.33□□□□□ -0.28
Rpusd1Q8VCZ8 Gm12390-201ENSMUST00000117897 397 ntBASIC13.33□□□□□ -0.28
Rpusd1Q8VCZ8 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rpusd1Q8VCZ8 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Rpusd1Q8VCZ8 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rpusd1Q8VCZ8 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC13.33□□□□□ -0.28
Rpusd1Q8VCZ8 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rpusd1Q8VCZ8 Gm7287-201ENSMUST00000205267 602 ntBASIC13.33□□□□□ -0.28
Rpusd1Q8VCZ8 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC13.33□□□□□ -0.28
Rpusd1Q8VCZ8 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rpusd1Q8VCZ8 Gm9899-201ENSMUST00000065519 555 ntBASIC13.33□□□□□ -0.28
Rpusd1Q8VCZ8 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rpusd1Q8VCZ8 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rpusd1Q8VCZ8 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rpusd1Q8VCZ8 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rpusd1Q8VCZ8 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rpusd1Q8VCZ8 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rpusd1Q8VCZ8 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rpusd1Q8VCZ8 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC13.33□□□□□ -0.28
Rpusd1Q8VCZ8 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rpusd1Q8VCZ8 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rpusd1Q8VCZ8 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rpusd1Q8VCZ8 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rpusd1Q8VCZ8 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rpusd1Q8VCZ8 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rpusd1Q8VCZ8 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rpusd1Q8VCZ8 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Rpusd1Q8VCZ8 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Rpusd1Q8VCZ8 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rpusd1Q8VCZ8 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rpusd1Q8VCZ8 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rpusd1Q8VCZ8 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Rpusd1Q8VCZ8 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rpusd1Q8VCZ8 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rpusd1Q8VCZ8 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rpusd1Q8VCZ8 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rpusd1Q8VCZ8 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rpusd1Q8VCZ8 Gm12485-201ENSMUST00000119641 291 ntBASIC13.32□□□□□ -0.28
Rpusd1Q8VCZ8 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rpusd1Q8VCZ8 Gm27486-201ENSMUST00000184923 80 ntBASIC13.32□□□□□ -0.28
Rpusd1Q8VCZ8 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rpusd1Q8VCZ8 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rpusd1Q8VCZ8 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rpusd1Q8VCZ8 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rpusd1Q8VCZ8 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC13.32□□□□□ -0.28
Rpusd1Q8VCZ8 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rpusd1Q8VCZ8 Gm8775-201ENSMUST00000170943 1327 ntBASIC13.32□□□□□ -0.28
Rpusd1Q8VCZ8 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rpusd1Q8VCZ8 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rpusd1Q8VCZ8 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rpusd1Q8VCZ8 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rpusd1Q8VCZ8 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rpusd1Q8VCZ8 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rpusd1Q8VCZ8 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rpusd1Q8VCZ8 Gm10605-202ENSMUST00000183019 3198 ntBASIC13.32□□□□□ -0.28
Rpusd1Q8VCZ8 AL645783.1-201ENSMUST00000221416 1832 ntBASIC13.32□□□□□ -0.28
Rpusd1Q8VCZ8 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rpusd1Q8VCZ8 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rpusd1Q8VCZ8 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC13.31□□□□□ -0.28
Rpusd1Q8VCZ8 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Rpusd1Q8VCZ8 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms