Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rnf8Q8VC56 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rnf8Q8VC56 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rnf8Q8VC56 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC13.57□□□□□ -0.24
Rnf8Q8VC56 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rnf8Q8VC56 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rnf8Q8VC56 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rnf8Q8VC56 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rnf8Q8VC56 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rnf8Q8VC56 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rnf8Q8VC56 Gm12500-202ENSMUST00000186471 2428 ntBASIC13.57□□□□□ -0.24
Rnf8Q8VC56 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rnf8Q8VC56 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC13.57□□□□□ -0.24
Rnf8Q8VC56 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Rnf8Q8VC56 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rnf8Q8VC56 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Rnf8Q8VC56 Gm9726-201ENSMUST00000180321 678 ntBASIC13.57□□□□□ -0.24
Rnf8Q8VC56 Gm6944-201ENSMUST00000182449 1006 ntBASIC13.57□□□□□ -0.24
Rnf8Q8VC56 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Rnf8Q8VC56 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC13.57□□□□□ -0.24
Rnf8Q8VC56 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC13.57□□□□□ -0.24
Rnf8Q8VC56 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rnf8Q8VC56 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Rnf8Q8VC56 Acot6-202ENSMUST00000222921 3622 ntBASIC13.57□□□□□ -0.24
Rnf8Q8VC56 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rnf8Q8VC56 Matn2-206ENSMUST00000228570 2798 ntBASIC13.57□□□□□ -0.24
Rnf8Q8VC56 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC13.57□□□□□ -0.24
Rnf8Q8VC56 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rnf8Q8VC56 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Rnf8Q8VC56 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rnf8Q8VC56 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC13.57□□□□□ -0.24
Rnf8Q8VC56 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rnf8Q8VC56 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Rnf8Q8VC56 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rnf8Q8VC56 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rnf8Q8VC56 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rnf8Q8VC56 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rnf8Q8VC56 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC13.56□□□□□ -0.24
Rnf8Q8VC56 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Rnf8Q8VC56 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rnf8Q8VC56 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rnf8Q8VC56 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rnf8Q8VC56 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rnf8Q8VC56 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rnf8Q8VC56 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Rnf8Q8VC56 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC13.56□□□□□ -0.24
Rnf8Q8VC56 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Rnf8Q8VC56 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC13.56□□□□□ -0.24
Rnf8Q8VC56 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC13.56□□□□□ -0.24
Rnf8Q8VC56 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC13.56□□□□□ -0.24
Rnf8Q8VC56 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rnf8Q8VC56 Gm8396-201ENSMUST00000057361 823 ntBASIC13.56□□□□□ -0.24
Rnf8Q8VC56 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC13.56□□□□□ -0.24
Rnf8Q8VC56 Gm18244-201ENSMUST00000219747 1566 ntBASIC13.56□□□□□ -0.24
Rnf8Q8VC56 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rnf8Q8VC56 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rnf8Q8VC56 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rnf8Q8VC56 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rnf8Q8VC56 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Rnf8Q8VC56 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rnf8Q8VC56 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rnf8Q8VC56 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rnf8Q8VC56 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Rnf8Q8VC56 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Rnf8Q8VC56 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rnf8Q8VC56 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rnf8Q8VC56 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Rnf8Q8VC56 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Rnf8Q8VC56 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rnf8Q8VC56 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rnf8Q8VC56 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rnf8Q8VC56 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rnf8Q8VC56 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rnf8Q8VC56 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rnf8Q8VC56 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rnf8Q8VC56 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rnf8Q8VC56 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rnf8Q8VC56 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Rnf8Q8VC56 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC13.55□□□□□ -0.24
Rnf8Q8VC56 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC13.55□□□□□ -0.24
Rnf8Q8VC56 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC13.55□□□□□ -0.24
Rnf8Q8VC56 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC13.55□□□□□ -0.24
Rnf8Q8VC56 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Rnf8Q8VC56 Gm20553-201ENSMUST00000204205 844 ntBASIC13.55□□□□□ -0.24
Rnf8Q8VC56 AC155252.2-201ENSMUST00000226946 680 ntBASIC13.55□□□□□ -0.24
Rnf8Q8VC56 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Rnf8Q8VC56 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rnf8Q8VC56 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Rnf8Q8VC56 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rnf8Q8VC56 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rnf8Q8VC56 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC13.55□□□□□ -0.24
Rnf8Q8VC56 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rnf8Q8VC56 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Rnf8Q8VC56 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rnf8Q8VC56 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rnf8Q8VC56 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC13.55□□□□□ -0.24
Rnf8Q8VC56 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Rnf8Q8VC56 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rnf8Q8VC56 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rnf8Q8VC56 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 56.6 ms