Protein–RNA interactions for Protein: Q8R4U6

Top1mt, DNA topoisomerase I, mitochondrial, mousemouse

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Top1mtQ8R4U6 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Top1mtQ8R4U6 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Top1mtQ8R4U6 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC16.81■□□□□ 0.28
Top1mtQ8R4U6 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
Top1mtQ8R4U6 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Top1mtQ8R4U6 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Top1mtQ8R4U6 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Top1mtQ8R4U6 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC16.81■□□□□ 0.28
Top1mtQ8R4U6 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
Top1mtQ8R4U6 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC16.81■□□□□ 0.28
Top1mtQ8R4U6 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC16.81■□□□□ 0.28
Top1mtQ8R4U6 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Top1mtQ8R4U6 Gm22175-201ENSMUST00000175007 78 ntBASIC16.81■□□□□ 0.28
Top1mtQ8R4U6 Gm18027-201ENSMUST00000218947 619 ntBASIC16.81■□□□□ 0.28
Top1mtQ8R4U6 AC124732.2-201ENSMUST00000221977 316 ntBASIC16.81■□□□□ 0.28
Top1mtQ8R4U6 CT030704.2-201ENSMUST00000228887 494 ntBASIC16.81■□□□□ 0.28
Top1mtQ8R4U6 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Top1mtQ8R4U6 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Top1mtQ8R4U6 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Top1mtQ8R4U6 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Top1mtQ8R4U6 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Top1mtQ8R4U6 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Top1mtQ8R4U6 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Top1mtQ8R4U6 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Top1mtQ8R4U6 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Top1mtQ8R4U6 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Top1mtQ8R4U6 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Top1mtQ8R4U6 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC16.81■□□□□ 0.28
Top1mtQ8R4U6 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Top1mtQ8R4U6 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Top1mtQ8R4U6 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Top1mtQ8R4U6 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Top1mtQ8R4U6 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Top1mtQ8R4U6 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Top1mtQ8R4U6 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Top1mtQ8R4U6 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC16.8■□□□□ 0.28
Top1mtQ8R4U6 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Top1mtQ8R4U6 Gm43399-201ENSMUST00000202546 2374 ntBASIC16.8■□□□□ 0.28
Top1mtQ8R4U6 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Top1mtQ8R4U6 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Top1mtQ8R4U6 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Top1mtQ8R4U6 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Top1mtQ8R4U6 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC16.8■□□□□ 0.28
Top1mtQ8R4U6 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Top1mtQ8R4U6 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Top1mtQ8R4U6 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Top1mtQ8R4U6 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Top1mtQ8R4U6 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Top1mtQ8R4U6 Gm25144-201ENSMUST00000179561 110 ntBASIC16.8■□□□□ 0.28
Top1mtQ8R4U6 Gm25352-201ENSMUST00000179815 110 ntBASIC16.8■□□□□ 0.28
Top1mtQ8R4U6 Gm27618-201ENSMUST00000183671 60 ntBASIC16.8■□□□□ 0.28
Top1mtQ8R4U6 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Top1mtQ8R4U6 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Top1mtQ8R4U6 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Top1mtQ8R4U6 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Top1mtQ8R4U6 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Top1mtQ8R4U6 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Top1mtQ8R4U6 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Top1mtQ8R4U6 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Top1mtQ8R4U6 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Top1mtQ8R4U6 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC16.8■□□□□ 0.28
Top1mtQ8R4U6 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Top1mtQ8R4U6 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Top1mtQ8R4U6 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Top1mtQ8R4U6 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC16.79■□□□□ 0.28
Top1mtQ8R4U6 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Top1mtQ8R4U6 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Top1mtQ8R4U6 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Top1mtQ8R4U6 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Top1mtQ8R4U6 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Top1mtQ8R4U6 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Top1mtQ8R4U6 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Top1mtQ8R4U6 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Top1mtQ8R4U6 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Top1mtQ8R4U6 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Top1mtQ8R4U6 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Top1mtQ8R4U6 Gm15653-201ENSMUST00000119247 907 ntBASIC16.79■□□□□ 0.28
Top1mtQ8R4U6 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Top1mtQ8R4U6 Gm38294-201ENSMUST00000192831 381 ntBASIC16.79■□□□□ 0.28
Top1mtQ8R4U6 Gm37714-201ENSMUST00000194742 342 ntBASIC16.79■□□□□ 0.28
Top1mtQ8R4U6 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Top1mtQ8R4U6 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC16.79■□□□□ 0.28
Top1mtQ8R4U6 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Top1mtQ8R4U6 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Top1mtQ8R4U6 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Top1mtQ8R4U6 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Top1mtQ8R4U6 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Top1mtQ8R4U6 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Top1mtQ8R4U6 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Top1mtQ8R4U6 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Top1mtQ8R4U6 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Top1mtQ8R4U6 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Top1mtQ8R4U6 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Top1mtQ8R4U6 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Top1mtQ8R4U6 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC16.78■□□□□ 0.28
Top1mtQ8R4U6 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Top1mtQ8R4U6 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Top1mtQ8R4U6 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Top1mtQ8R4U6 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC16.78■□□□□ 0.28
Top1mtQ8R4U6 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC16.78■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms