Protein–RNA interactions for Protein: Q8CDW1

Fam228a, Protein FAM228A, mousemouse

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam228aQ8CDW1 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Fam228aQ8CDW1 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Fam228aQ8CDW1 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC14.75□□□□□ -0.05
Fam228aQ8CDW1 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Fam228aQ8CDW1 Gm44065-201ENSMUST00000203184 3527 ntBASIC14.75□□□□□ -0.05
Fam228aQ8CDW1 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC14.75□□□□□ -0.05
Fam228aQ8CDW1 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Fam228aQ8CDW1 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Fam228aQ8CDW1 Grk6-205ENSMUST00000224653 2976 ntBASIC14.75□□□□□ -0.05
Fam228aQ8CDW1 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Fam228aQ8CDW1 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC14.75□□□□□ -0.05
Fam228aQ8CDW1 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC14.75□□□□□ -0.05
Fam228aQ8CDW1 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC14.75□□□□□ -0.05
Fam228aQ8CDW1 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC14.75□□□□□ -0.05
Fam228aQ8CDW1 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Fam228aQ8CDW1 Nudt18-203ENSMUST00000228768 1578 ntBASIC14.75□□□□□ -0.05
Fam228aQ8CDW1 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Fam228aQ8CDW1 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Fam228aQ8CDW1 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Fam228aQ8CDW1 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Fam228aQ8CDW1 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Fam228aQ8CDW1 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Fam228aQ8CDW1 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Fam228aQ8CDW1 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Fam228aQ8CDW1 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Fam228aQ8CDW1 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Fam228aQ8CDW1 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Fam228aQ8CDW1 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Fam228aQ8CDW1 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Fam228aQ8CDW1 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Fam228aQ8CDW1 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Fam228aQ8CDW1 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Fam228aQ8CDW1 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Fam228aQ8CDW1 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC14.74□□□□□ -0.05
Fam228aQ8CDW1 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Fam228aQ8CDW1 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC14.74□□□□□ -0.05
Fam228aQ8CDW1 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC14.74□□□□□ -0.05
Fam228aQ8CDW1 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Fam228aQ8CDW1 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Fam228aQ8CDW1 Gm7977-201ENSMUST00000193787 748 ntBASIC14.74□□□□□ -0.05
Fam228aQ8CDW1 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Fam228aQ8CDW1 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
Fam228aQ8CDW1 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Fam228aQ8CDW1 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Fam228aQ8CDW1 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Fam228aQ8CDW1 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Fam228aQ8CDW1 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Fam228aQ8CDW1 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Fam228aQ8CDW1 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Fam228aQ8CDW1 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Fam228aQ8CDW1 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Fam228aQ8CDW1 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Fam228aQ8CDW1 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Fam228aQ8CDW1 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Fam228aQ8CDW1 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC14.74□□□□□ -0.05
Fam228aQ8CDW1 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Fam228aQ8CDW1 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Fam228aQ8CDW1 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
Fam228aQ8CDW1 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Fam228aQ8CDW1 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Fam228aQ8CDW1 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Fam228aQ8CDW1 Gm12500-202ENSMUST00000186471 2428 ntBASIC14.73□□□□□ -0.05
Fam228aQ8CDW1 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Fam228aQ8CDW1 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Fam228aQ8CDW1 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Fam228aQ8CDW1 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Fam228aQ8CDW1 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Fam228aQ8CDW1 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC14.73□□□□□ -0.05
Fam228aQ8CDW1 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Fam228aQ8CDW1 Gm12882-201ENSMUST00000121696 517 ntBASIC14.73□□□□□ -0.05
Fam228aQ8CDW1 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Fam228aQ8CDW1 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Fam228aQ8CDW1 Gm27920-201ENSMUST00000183953 96 ntBASIC14.73□□□□□ -0.05
Fam228aQ8CDW1 Gm28659-201ENSMUST00000188013 759 ntBASIC14.73□□□□□ -0.05
Fam228aQ8CDW1 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Fam228aQ8CDW1 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Fam228aQ8CDW1 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Fam228aQ8CDW1 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Fam228aQ8CDW1 AC154527.4-201ENSMUST00000224364 1667 ntBASIC14.73□□□□□ -0.05
Fam228aQ8CDW1 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC14.73□□□□□ -0.05
Fam228aQ8CDW1 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC14.73□□□□□ -0.05
Fam228aQ8CDW1 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Fam228aQ8CDW1 Gm9347-201ENSMUST00000211473 1607 ntBASIC14.73□□□□□ -0.05
Fam228aQ8CDW1 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Fam228aQ8CDW1 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Fam228aQ8CDW1 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Fam228aQ8CDW1 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Fam228aQ8CDW1 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Fam228aQ8CDW1 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC14.73□□□□□ -0.05
Fam228aQ8CDW1 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Fam228aQ8CDW1 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Fam228aQ8CDW1 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Fam228aQ8CDW1 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Fam228aQ8CDW1 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Fam228aQ8CDW1 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Fam228aQ8CDW1 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC14.72□□□□□ -0.05
Fam228aQ8CDW1 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Fam228aQ8CDW1 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Fam228aQ8CDW1 AC154262.2-201ENSMUST00000224310 2293 ntBASIC14.72□□□□□ -0.05
Fam228aQ8CDW1 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms