Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC15.56■□□□□ 0.08
Trim47Q8C0E3 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Trim47Q8C0E3 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim47Q8C0E3 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Trim47Q8C0E3 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim47Q8C0E3 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim47Q8C0E3 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim47Q8C0E3 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trim47Q8C0E3 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC15.56■□□□□ 0.08
Trim47Q8C0E3 H2-Pa-201ENSMUST00000182803 626 ntBASIC15.56■□□□□ 0.08
Trim47Q8C0E3 Gm28760-201ENSMUST00000185995 736 ntBASIC15.56■□□□□ 0.08
Trim47Q8C0E3 Gm31326-201ENSMUST00000191856 1048 ntBASIC15.56■□□□□ 0.08
Trim47Q8C0E3 AL593843.1-201ENSMUST00000195891 145 ntBASIC15.56■□□□□ 0.08
Trim47Q8C0E3 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim47Q8C0E3 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Trim47Q8C0E3 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC15.56■□□□□ 0.08
Trim47Q8C0E3 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trim47Q8C0E3 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim47Q8C0E3 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Trim47Q8C0E3 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trim47Q8C0E3 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim47Q8C0E3 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim47Q8C0E3 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trim47Q8C0E3 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim47Q8C0E3 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim47Q8C0E3 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim47Q8C0E3 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim47Q8C0E3 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim47Q8C0E3 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim47Q8C0E3 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim47Q8C0E3 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim47Q8C0E3 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim47Q8C0E3 Gm42690-201ENSMUST00000197921 1836 ntBASIC15.55■□□□□ 0.08
Trim47Q8C0E3 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim47Q8C0E3 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Trim47Q8C0E3 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim47Q8C0E3 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim47Q8C0E3 Zcwpw2-202ENSMUST00000187329 1469 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trim47Q8C0E3 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC15.55■□□□□ 0.08
Trim47Q8C0E3 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC15.55■□□□□ 0.08
Trim47Q8C0E3 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim47Q8C0E3 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim47Q8C0E3 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trim47Q8C0E3 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
Trim47Q8C0E3 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC15.55■□□□□ 0.08
Trim47Q8C0E3 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC15.55■□□□□ 0.08
Trim47Q8C0E3 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC15.55■□□□□ 0.08
Trim47Q8C0E3 Gtpbp10-211ENSMUST00000198799 648 ntBASIC15.55■□□□□ 0.08
Trim47Q8C0E3 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC15.55■□□□□ 0.08
Trim47Q8C0E3 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim47Q8C0E3 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim47Q8C0E3 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trim47Q8C0E3 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim47Q8C0E3 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Trim47Q8C0E3 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC15.55■□□□□ 0.08
Trim47Q8C0E3 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim47Q8C0E3 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim47Q8C0E3 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trim47Q8C0E3 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim47Q8C0E3 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim47Q8C0E3 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim47Q8C0E3 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trim47Q8C0E3 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Trim47Q8C0E3 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trim47Q8C0E3 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Trim47Q8C0E3 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim47Q8C0E3 AC159196.2-201ENSMUST00000224082 1622 ntBASIC15.54■□□□□ 0.08
Trim47Q8C0E3 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim47Q8C0E3 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim47Q8C0E3 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim47Q8C0E3 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC15.54■□□□□ 0.08
Trim47Q8C0E3 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim47Q8C0E3 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Trim47Q8C0E3 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trim47Q8C0E3 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC15.54■□□□□ 0.08
Trim47Q8C0E3 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
Trim47Q8C0E3 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trim47Q8C0E3 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC15.54■□□□□ 0.08
Trim47Q8C0E3 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trim47Q8C0E3 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC15.54■□□□□ 0.08
Trim47Q8C0E3 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Trim47Q8C0E3 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim47Q8C0E3 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim47Q8C0E3 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC15.54■□□□□ 0.08
Trim47Q8C0E3 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim47Q8C0E3 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim47Q8C0E3 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim47Q8C0E3 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Trim47Q8C0E3 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim47Q8C0E3 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC15.53■□□□□ 0.08
Trim47Q8C0E3 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim47Q8C0E3 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim47Q8C0E3 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim47Q8C0E3 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC15.53■□□□□ 0.08
Trim47Q8C0E3 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim47Q8C0E3 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim47Q8C0E3 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim47Q8C0E3 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim47Q8C0E3 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim47Q8C0E3 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC15.53■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms