Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sfr1Q8BP27 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sfr1Q8BP27 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sfr1Q8BP27 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC14.34□□□□□ -0.11
Sfr1Q8BP27 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Sfr1Q8BP27 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sfr1Q8BP27 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sfr1Q8BP27 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Sfr1Q8BP27 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Sfr1Q8BP27 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Sfr1Q8BP27 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Sfr1Q8BP27 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Sfr1Q8BP27 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Sfr1Q8BP27 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Sfr1Q8BP27 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Sfr1Q8BP27 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Sfr1Q8BP27 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sfr1Q8BP27 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Sfr1Q8BP27 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sfr1Q8BP27 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sfr1Q8BP27 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Sfr1Q8BP27 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Sfr1Q8BP27 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sfr1Q8BP27 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Sfr1Q8BP27 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sfr1Q8BP27 Gm13223-201ENSMUST00000118609 747 ntBASIC14.33□□□□□ -0.12
Sfr1Q8BP27 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC14.33□□□□□ -0.12
Sfr1Q8BP27 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Sfr1Q8BP27 Gm38294-201ENSMUST00000192831 381 ntBASIC14.33□□□□□ -0.12
Sfr1Q8BP27 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Sfr1Q8BP27 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sfr1Q8BP27 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sfr1Q8BP27 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Sfr1Q8BP27 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Sfr1Q8BP27 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sfr1Q8BP27 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Sfr1Q8BP27 Gm45630-201ENSMUST00000210243 1911 ntBASIC14.33□□□□□ -0.12
Sfr1Q8BP27 Nupl1-207ENSMUST00000225311 2475 ntBASIC14.33□□□□□ -0.12
Sfr1Q8BP27 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Sfr1Q8BP27 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Sfr1Q8BP27 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sfr1Q8BP27 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sfr1Q8BP27 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sfr1Q8BP27 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Sfr1Q8BP27 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sfr1Q8BP27 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Sfr1Q8BP27 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC14.32□□□□□ -0.12
Sfr1Q8BP27 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC14.32□□□□□ -0.12
Sfr1Q8BP27 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Sfr1Q8BP27 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sfr1Q8BP27 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sfr1Q8BP27 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Sfr1Q8BP27 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sfr1Q8BP27 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Sfr1Q8BP27 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Sfr1Q8BP27 Gm27680-201ENSMUST00000184192 160 ntBASIC14.32□□□□□ -0.12
Sfr1Q8BP27 Gm44344-201ENSMUST00000200287 129 ntBASIC14.32□□□□□ -0.12
Sfr1Q8BP27 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC14.32□□□□□ -0.12
Sfr1Q8BP27 AC121804.3-201ENSMUST00000223420 295 ntBASIC14.32□□□□□ -0.12
Sfr1Q8BP27 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sfr1Q8BP27 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Sfr1Q8BP27 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sfr1Q8BP27 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Sfr1Q8BP27 Ksr1-207ENSMUST00000226282 5260 ntBASIC14.32□□□□□ -0.12
Sfr1Q8BP27 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Sfr1Q8BP27 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sfr1Q8BP27 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Sfr1Q8BP27 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Sfr1Q8BP27 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
Sfr1Q8BP27 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
Sfr1Q8BP27 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sfr1Q8BP27 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Sfr1Q8BP27 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sfr1Q8BP27 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC14.31□□□□□ -0.12
Sfr1Q8BP27 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sfr1Q8BP27 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sfr1Q8BP27 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sfr1Q8BP27 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Sfr1Q8BP27 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sfr1Q8BP27 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sfr1Q8BP27 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC14.31□□□□□ -0.12
Sfr1Q8BP27 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Sfr1Q8BP27 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC14.31□□□□□ -0.12
Sfr1Q8BP27 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC14.31□□□□□ -0.12
Sfr1Q8BP27 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Sfr1Q8BP27 Mir7023-201ENSMUST00000185093 64 ntBASIC14.31□□□□□ -0.12
Sfr1Q8BP27 Gm44608-201ENSMUST00000206827 855 ntBASIC14.31□□□□□ -0.12
Sfr1Q8BP27 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Sfr1Q8BP27 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC14.31□□□□□ -0.12
Sfr1Q8BP27 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC14.31□□□□□ -0.12
Sfr1Q8BP27 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sfr1Q8BP27 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sfr1Q8BP27 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Sfr1Q8BP27 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC14.31□□□□□ -0.12
Sfr1Q8BP27 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sfr1Q8BP27 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sfr1Q8BP27 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sfr1Q8BP27 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sfr1Q8BP27 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sfr1Q8BP27 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms