Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC12.31□□□□□ -0.44
Snrnp40Q6PE01 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Snrnp40Q6PE01 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC12.31□□□□□ -0.44
Snrnp40Q6PE01 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Snrnp40Q6PE01 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Snrnp40Q6PE01 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Snrnp40Q6PE01 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Snrnp40Q6PE01 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Snrnp40Q6PE01 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Snrnp40Q6PE01 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Snrnp40Q6PE01 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC12.31□□□□□ -0.44
Snrnp40Q6PE01 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Snrnp40Q6PE01 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Snrnp40Q6PE01 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Snrnp40Q6PE01 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Snrnp40Q6PE01 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Snrnp40Q6PE01 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
Snrnp40Q6PE01 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Snrnp40Q6PE01 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Snrnp40Q6PE01 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Snrnp40Q6PE01 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Snrnp40Q6PE01 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC12.3□□□□□ -0.44
Snrnp40Q6PE01 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Snrnp40Q6PE01 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Snrnp40Q6PE01 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Snrnp40Q6PE01 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Snrnp40Q6PE01 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Snrnp40Q6PE01 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Snrnp40Q6PE01 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
Snrnp40Q6PE01 Gm11803-201ENSMUST00000119966 444 ntBASIC12.3□□□□□ -0.44
Snrnp40Q6PE01 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC12.3□□□□□ -0.44
Snrnp40Q6PE01 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC12.3□□□□□ -0.44
Snrnp40Q6PE01 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Snrnp40Q6PE01 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Snrnp40Q6PE01 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Snrnp40Q6PE01 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC12.3□□□□□ -0.44
Snrnp40Q6PE01 Gm45880-201ENSMUST00000213041 853 ntBASIC12.3□□□□□ -0.44
Snrnp40Q6PE01 Gm18473-201ENSMUST00000220543 868 ntBASIC12.3□□□□□ -0.44
Snrnp40Q6PE01 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC12.3□□□□□ -0.44
Snrnp40Q6PE01 CT009713.10-202ENSMUST00000225734 696 ntBASIC12.3□□□□□ -0.44
Snrnp40Q6PE01 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Snrnp40Q6PE01 Mir497b-201ENSMUST00000093601 125 ntBASIC12.3□□□□□ -0.44
Snrnp40Q6PE01 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Snrnp40Q6PE01 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Snrnp40Q6PE01 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC12.3□□□□□ -0.44
Snrnp40Q6PE01 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Snrnp40Q6PE01 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC12.3□□□□□ -0.44
Snrnp40Q6PE01 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Snrnp40Q6PE01 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Snrnp40Q6PE01 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Snrnp40Q6PE01 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Snrnp40Q6PE01 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Snrnp40Q6PE01 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Snrnp40Q6PE01 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
Snrnp40Q6PE01 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Snrnp40Q6PE01 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Snrnp40Q6PE01 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC12.29□□□□□ -0.44
Snrnp40Q6PE01 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Snrnp40Q6PE01 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Snrnp40Q6PE01 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Snrnp40Q6PE01 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Snrnp40Q6PE01 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Snrnp40Q6PE01 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
Snrnp40Q6PE01 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Snrnp40Q6PE01 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC12.29□□□□□ -0.44
Snrnp40Q6PE01 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Snrnp40Q6PE01 AC161252.3-201ENSMUST00000225465 1549 ntBASIC12.29□□□□□ -0.44
Snrnp40Q6PE01 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Snrnp40Q6PE01 Gm12329-201ENSMUST00000120829 1007 ntBASIC12.29□□□□□ -0.44
Snrnp40Q6PE01 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Snrnp40Q6PE01 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Snrnp40Q6PE01 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Snrnp40Q6PE01 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Snrnp40Q6PE01 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Snrnp40Q6PE01 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Snrnp40Q6PE01 AC154276.1-201ENSMUST00000228874 1299 ntBASIC12.29□□□□□ -0.44
Snrnp40Q6PE01 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Snrnp40Q6PE01 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Snrnp40Q6PE01 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Snrnp40Q6PE01 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Snrnp40Q6PE01 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Snrnp40Q6PE01 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Snrnp40Q6PE01 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Snrnp40Q6PE01 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Snrnp40Q6PE01 Gm12846-201ENSMUST00000120431 1373 ntBASIC12.29□□□□□ -0.44
Snrnp40Q6PE01 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Snrnp40Q6PE01 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Snrnp40Q6PE01 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Snrnp40Q6PE01 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Snrnp40Q6PE01 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Snrnp40Q6PE01 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Snrnp40Q6PE01 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Snrnp40Q6PE01 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Snrnp40Q6PE01 Carlr-201ENSMUST00000181515 2574 ntBASIC12.28□□□□□ -0.44
Snrnp40Q6PE01 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Snrnp40Q6PE01 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Snrnp40Q6PE01 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Snrnp40Q6PE01 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC12.28□□□□□ -0.44
Snrnp40Q6PE01 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Snrnp40Q6PE01 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms