Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.48
Chd4Q6PDQ2 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Chd4Q6PDQ2 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Chd4Q6PDQ2 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Chd4Q6PDQ2 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC18.02■□□□□ 0.47
Chd4Q6PDQ2 Gm14608-201ENSMUST00000120030 1553 ntBASIC18.02■□□□□ 0.47
Chd4Q6PDQ2 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
Chd4Q6PDQ2 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Chd4Q6PDQ2 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC18.02■□□□□ 0.47
Chd4Q6PDQ2 Gm37922-201ENSMUST00000195596 455 ntBASIC18.02■□□□□ 0.47
Chd4Q6PDQ2 Tyms-ps-201ENSMUST00000219550 915 ntBASIC18.02■□□□□ 0.47
Chd4Q6PDQ2 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Chd4Q6PDQ2 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Chd4Q6PDQ2 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Chd4Q6PDQ2 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Chd4Q6PDQ2 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Chd4Q6PDQ2 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Chd4Q6PDQ2 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Chd4Q6PDQ2 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Chd4Q6PDQ2 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Chd4Q6PDQ2 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Chd4Q6PDQ2 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Chd4Q6PDQ2 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Chd4Q6PDQ2 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Chd4Q6PDQ2 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Chd4Q6PDQ2 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC18.01■□□□□ 0.47
Chd4Q6PDQ2 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC18.01■□□□□ 0.47
Chd4Q6PDQ2 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Chd4Q6PDQ2 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Chd4Q6PDQ2 Gm17823-201ENSMUST00000217830 1006 ntBASIC18.01■□□□□ 0.47
Chd4Q6PDQ2 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Chd4Q6PDQ2 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Chd4Q6PDQ2 Olfr582-201ENSMUST00000098212 960 ntBASIC18.01■□□□□ 0.47
Chd4Q6PDQ2 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Chd4Q6PDQ2 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC18.01■□□□□ 0.47
Chd4Q6PDQ2 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Chd4Q6PDQ2 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Chd4Q6PDQ2 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Chd4Q6PDQ2 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Chd4Q6PDQ2 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Chd4Q6PDQ2 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Chd4Q6PDQ2 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Chd4Q6PDQ2 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC18■□□□□ 0.47
Chd4Q6PDQ2 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Chd4Q6PDQ2 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Chd4Q6PDQ2 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Chd4Q6PDQ2 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC18■□□□□ 0.47
Chd4Q6PDQ2 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC18■□□□□ 0.47
Chd4Q6PDQ2 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Chd4Q6PDQ2 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Chd4Q6PDQ2 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC18■□□□□ 0.47
Chd4Q6PDQ2 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC18■□□□□ 0.47
Chd4Q6PDQ2 Gm43758-201ENSMUST00000199500 367 ntBASIC18■□□□□ 0.47
Chd4Q6PDQ2 Gm44974-201ENSMUST00000206387 1279 ntBASIC18■□□□□ 0.47
Chd4Q6PDQ2 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Chd4Q6PDQ2 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Chd4Q6PDQ2 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Chd4Q6PDQ2 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Chd4Q6PDQ2 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC18■□□□□ 0.47
Chd4Q6PDQ2 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Chd4Q6PDQ2 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC18■□□□□ 0.47
Chd4Q6PDQ2 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
Chd4Q6PDQ2 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Chd4Q6PDQ2 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Chd4Q6PDQ2 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Chd4Q6PDQ2 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Chd4Q6PDQ2 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC18■□□□□ 0.47
Chd4Q6PDQ2 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Chd4Q6PDQ2 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
Chd4Q6PDQ2 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Chd4Q6PDQ2 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC18■□□□□ 0.47
Chd4Q6PDQ2 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC18■□□□□ 0.47
Chd4Q6PDQ2 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC18■□□□□ 0.47
Chd4Q6PDQ2 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC18■□□□□ 0.47
Chd4Q6PDQ2 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Chd4Q6PDQ2 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC18■□□□□ 0.47
Chd4Q6PDQ2 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC18■□□□□ 0.47
Chd4Q6PDQ2 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Chd4Q6PDQ2 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.99■□□□□ 0.47
Chd4Q6PDQ2 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Chd4Q6PDQ2 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Chd4Q6PDQ2 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Chd4Q6PDQ2 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Chd4Q6PDQ2 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Chd4Q6PDQ2 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Chd4Q6PDQ2 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Chd4Q6PDQ2 Gm12134-201ENSMUST00000122109 520 ntBASIC17.99■□□□□ 0.47
Chd4Q6PDQ2 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Chd4Q6PDQ2 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Chd4Q6PDQ2 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC17.99■□□□□ 0.47
Chd4Q6PDQ2 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Chd4Q6PDQ2 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Chd4Q6PDQ2 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
Chd4Q6PDQ2 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Chd4Q6PDQ2 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
Chd4Q6PDQ2 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Chd4Q6PDQ2 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Chd4Q6PDQ2 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Chd4Q6PDQ2 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Chd4Q6PDQ2 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms