Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC16.22■□□□□ 0.19
Scn9aQ62205 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Scn9aQ62205 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC16.22■□□□□ 0.19
Scn9aQ62205 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Scn9aQ62205 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Scn9aQ62205 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Scn9aQ62205 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Scn9aQ62205 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC16.22■□□□□ 0.19
Scn9aQ62205 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Scn9aQ62205 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Scn9aQ62205 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Scn9aQ62205 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Scn9aQ62205 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Scn9aQ62205 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Scn9aQ62205 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC16.22■□□□□ 0.19
Scn9aQ62205 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC16.22■□□□□ 0.19
Scn9aQ62205 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
Scn9aQ62205 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Scn9aQ62205 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Scn9aQ62205 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Scn9aQ62205 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC16.22■□□□□ 0.19
Scn9aQ62205 Gm43138-201ENSMUST00000199123 708 ntBASIC16.22■□□□□ 0.19
Scn9aQ62205 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Scn9aQ62205 Gm44064-201ENSMUST00000204964 1087 ntBASIC16.22■□□□□ 0.19
Scn9aQ62205 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
Scn9aQ62205 AC122371.3-201ENSMUST00000223402 1061 ntBASIC16.22■□□□□ 0.19
Scn9aQ62205 Nsd1-205ENSMUST00000224693 852 ntBASIC16.22■□□□□ 0.19
Scn9aQ62205 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Scn9aQ62205 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Scn9aQ62205 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Scn9aQ62205 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Scn9aQ62205 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC16.21■□□□□ 0.19
Scn9aQ62205 Gm8337-201ENSMUST00000187358 1938 ntBASIC16.21■□□□□ 0.19
Scn9aQ62205 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC16.21■□□□□ 0.19
Scn9aQ62205 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Scn9aQ62205 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Scn9aQ62205 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Scn9aQ62205 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC16.21■□□□□ 0.19
Scn9aQ62205 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Scn9aQ62205 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC16.21■□□□□ 0.19
Scn9aQ62205 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Scn9aQ62205 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Scn9aQ62205 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC16.21■□□□□ 0.19
Scn9aQ62205 Mir698-201ENSMUST00000102164 109 ntBASIC16.21■□□□□ 0.19
Scn9aQ62205 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC16.21■□□□□ 0.19
Scn9aQ62205 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Scn9aQ62205 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Scn9aQ62205 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Scn9aQ62205 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Scn9aQ62205 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Scn9aQ62205 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Scn9aQ62205 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Scn9aQ62205 Gm9867-201ENSMUST00000192212 2647 ntBASIC16.21■□□□□ 0.19
Scn9aQ62205 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Scn9aQ62205 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Scn9aQ62205 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Scn9aQ62205 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Scn9aQ62205 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.18
Scn9aQ62205 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Scn9aQ62205 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
Scn9aQ62205 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
Scn9aQ62205 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
Scn9aQ62205 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Scn9aQ62205 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Scn9aQ62205 Gm4986-201ENSMUST00000119731 549 ntBASIC16.2■□□□□ 0.18
Scn9aQ62205 Gm9431-201ENSMUST00000119765 1051 ntBASIC16.2■□□□□ 0.18
Scn9aQ62205 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Scn9aQ62205 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC16.2■□□□□ 0.18
Scn9aQ62205 Gm25668-201ENSMUST00000157700 129 ntBASIC16.2■□□□□ 0.18
Scn9aQ62205 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC16.2■□□□□ 0.18
Scn9aQ62205 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Scn9aQ62205 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
Scn9aQ62205 Gm17330-201ENSMUST00000221047 165 ntBASIC16.2■□□□□ 0.18
Scn9aQ62205 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Scn9aQ62205 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Scn9aQ62205 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Scn9aQ62205 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Scn9aQ62205 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Scn9aQ62205 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Scn9aQ62205 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Scn9aQ62205 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Scn9aQ62205 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC16.2■□□□□ 0.18
Scn9aQ62205 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Scn9aQ62205 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Scn9aQ62205 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Scn9aQ62205 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Scn9aQ62205 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC16.2■□□□□ 0.18
Scn9aQ62205 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Scn9aQ62205 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Scn9aQ62205 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Scn9aQ62205 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Scn9aQ62205 Gm8793-201ENSMUST00000183069 1303 ntBASIC16.19■□□□□ 0.18
Scn9aQ62205 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Scn9aQ62205 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Scn9aQ62205 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Scn9aQ62205 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Scn9aQ62205 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Scn9aQ62205 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Scn9aQ62205 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Scn9aQ62205 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms