Protein–RNA interactions for Protein: Q62158

Trim27, Zinc finger protein RFP, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27Q62158 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim27Q62158 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trim27Q62158 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Trim27Q62158 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim27Q62158 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim27Q62158 Gm30238-201ENSMUST00000195528 2603 ntBASIC17.24■□□□□ 0.35
Trim27Q62158 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim27Q62158 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim27Q62158 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim27Q62158 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim27Q62158 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC17.24■□□□□ 0.35
Trim27Q62158 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim27Q62158 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Trim27Q62158 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
Trim27Q62158 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC17.24■□□□□ 0.35
Trim27Q62158 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trim27Q62158 Gm3809-201ENSMUST00000180973 1006 ntBASIC17.24■□□□□ 0.35
Trim27Q62158 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trim27Q62158 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC17.24■□□□□ 0.35
Trim27Q62158 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC17.24■□□□□ 0.35
Trim27Q62158 Gm9063-201ENSMUST00000223299 582 ntBASIC17.24■□□□□ 0.35
Trim27Q62158 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim27Q62158 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC17.24■□□□□ 0.35
Trim27Q62158 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim27Q62158 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim27Q62158 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
Trim27Q62158 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim27Q62158 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim27Q62158 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim27Q62158 Zkscan14-203ENSMUST00000198959 2243 ntBASIC17.24■□□□□ 0.35
Trim27Q62158 Gm2420-202ENSMUST00000202224 2249 ntBASIC17.24■□□□□ 0.35
Trim27Q62158 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Trim27Q62158 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim27Q62158 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim27Q62158 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim27Q62158 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim27Q62158 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim27Q62158 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trim27Q62158 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim27Q62158 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim27Q62158 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trim27Q62158 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim27Q62158 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
Trim27Q62158 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim27Q62158 Gm13453-201ENSMUST00000118708 357 ntBASIC17.23■□□□□ 0.35
Trim27Q62158 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC17.23■□□□□ 0.35
Trim27Q62158 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Trim27Q62158 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC17.23■□□□□ 0.35
Trim27Q62158 Gm21470-201ENSMUST00000187680 696 ntBASIC17.23■□□□□ 0.35
Trim27Q62158 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Trim27Q62158 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim27Q62158 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Trim27Q62158 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Trim27Q62158 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim27Q62158 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trim27Q62158 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Trim27Q62158 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim27Q62158 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trim27Q62158 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trim27Q62158 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Trim27Q62158 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim27Q62158 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim27Q62158 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim27Q62158 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim27Q62158 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trim27Q62158 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Trim27Q62158 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC17.22■□□□□ 0.35
Trim27Q62158 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim27Q62158 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim27Q62158 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim27Q62158 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trim27Q62158 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trim27Q62158 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim27Q62158 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC17.22■□□□□ 0.35
Trim27Q62158 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trim27Q62158 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim27Q62158 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim27Q62158 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim27Q62158 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Trim27Q62158 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim27Q62158 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim27Q62158 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim27Q62158 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim27Q62158 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trim27Q62158 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim27Q62158 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim27Q62158 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim27Q62158 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim27Q62158 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trim27Q62158 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trim27Q62158 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim27Q62158 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim27Q62158 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim27Q62158 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim27Q62158 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim27Q62158 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim27Q62158 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim27Q62158 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC17.21■□□□□ 0.35
Trim27Q62158 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim27Q62158 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms