Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Smarcd1Q61466 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC14.62□□□□□ -0.07
Smarcd1Q61466 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Smarcd1Q61466 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Smarcd1Q61466 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
Smarcd1Q61466 Gm6912-201ENSMUST00000117218 544 ntBASIC14.62□□□□□ -0.07
Smarcd1Q61466 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Smarcd1Q61466 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC14.62□□□□□ -0.07
Smarcd1Q61466 Gm3809-201ENSMUST00000180973 1006 ntBASIC14.62□□□□□ -0.07
Smarcd1Q61466 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
Smarcd1Q61466 Gm6473-201ENSMUST00000188572 1210 ntBASIC14.62□□□□□ -0.07
Smarcd1Q61466 Gm29741-201ENSMUST00000192667 421 ntBASIC14.62□□□□□ -0.07
Smarcd1Q61466 Gtpbp10-211ENSMUST00000198799 648 ntBASIC14.62□□□□□ -0.07
Smarcd1Q61466 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC14.62□□□□□ -0.07
Smarcd1Q61466 Gm17795-201ENSMUST00000214505 757 ntBASIC14.62□□□□□ -0.07
Smarcd1Q61466 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Smarcd1Q61466 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Smarcd1Q61466 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Smarcd1Q61466 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Smarcd1Q61466 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Smarcd1Q61466 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Smarcd1Q61466 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC14.62□□□□□ -0.07
Smarcd1Q61466 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Smarcd1Q61466 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC14.62□□□□□ -0.07
Smarcd1Q61466 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Smarcd1Q61466 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Smarcd1Q61466 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Smarcd1Q61466 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
Smarcd1Q61466 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Smarcd1Q61466 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Smarcd1Q61466 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smarcd1Q61466 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smarcd1Q61466 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smarcd1Q61466 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smarcd1Q61466 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smarcd1Q61466 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smarcd1Q61466 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Smarcd1Q61466 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smarcd1Q61466 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Smarcd1Q61466 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC14.61□□□□□ -0.07
Smarcd1Q61466 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Smarcd1Q61466 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smarcd1Q61466 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC14.61□□□□□ -0.07
Smarcd1Q61466 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Smarcd1Q61466 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Smarcd1Q61466 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Smarcd1Q61466 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Smarcd1Q61466 Gm15240-201ENSMUST00000118156 720 ntBASIC14.61□□□□□ -0.07
Smarcd1Q61466 Gm13385-201ENSMUST00000121089 220 ntBASIC14.61□□□□□ -0.07
Smarcd1Q61466 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC14.61□□□□□ -0.07
Smarcd1Q61466 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC14.61□□□□□ -0.07
Smarcd1Q61466 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smarcd1Q61466 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Smarcd1Q61466 AL593843.1-201ENSMUST00000195891 145 ntBASIC14.61□□□□□ -0.07
Smarcd1Q61466 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smarcd1Q61466 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smarcd1Q61466 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smarcd1Q61466 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC14.61□□□□□ -0.07
Smarcd1Q61466 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Smarcd1Q61466 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smarcd1Q61466 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smarcd1Q61466 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smarcd1Q61466 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smarcd1Q61466 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smarcd1Q61466 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smarcd1Q61466 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Smarcd1Q61466 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Smarcd1Q61466 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smarcd1Q61466 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Smarcd1Q61466 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Smarcd1Q61466 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Smarcd1Q61466 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Smarcd1Q61466 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Smarcd1Q61466 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Smarcd1Q61466 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Smarcd1Q61466 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Smarcd1Q61466 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Smarcd1Q61466 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Smarcd1Q61466 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC14.6□□□□□ -0.07
Smarcd1Q61466 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Smarcd1Q61466 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Smarcd1Q61466 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Smarcd1Q61466 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC14.6□□□□□ -0.07
Smarcd1Q61466 Gm11557-201ENSMUST00000120200 1008 ntBASIC14.6□□□□□ -0.07
Smarcd1Q61466 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC14.6□□□□□ -0.07
Smarcd1Q61466 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Smarcd1Q61466 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
Smarcd1Q61466 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Smarcd1Q61466 Gm8927-201ENSMUST00000181978 981 ntBASIC14.6□□□□□ -0.07
Smarcd1Q61466 Gm3222-201ENSMUST00000071282 990 ntBASIC14.6□□□□□ -0.07
Smarcd1Q61466 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Smarcd1Q61466 Mir497b-201ENSMUST00000093601 125 ntBASIC14.6□□□□□ -0.07
Smarcd1Q61466 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Smarcd1Q61466 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Smarcd1Q61466 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Smarcd1Q61466 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Smarcd1Q61466 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Smarcd1Q61466 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Smarcd1Q61466 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC14.6□□□□□ -0.07
Smarcd1Q61466 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms