Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rnf20Q5DTM8 Gm24543-201ENSMUST00000103867 82 ntBASIC16.75■□□□□ 0.27
Rnf20Q5DTM8 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
Rnf20Q5DTM8 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Rnf20Q5DTM8 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Rnf20Q5DTM8 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rnf20Q5DTM8 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC16.75■□□□□ 0.27
Rnf20Q5DTM8 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC16.75■□□□□ 0.27
Rnf20Q5DTM8 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rnf20Q5DTM8 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Rnf20Q5DTM8 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Rnf20Q5DTM8 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rnf20Q5DTM8 Gm38577-201ENSMUST00000221531 4545 ntBASIC16.75■□□□□ 0.27
Rnf20Q5DTM8 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC16.75■□□□□ 0.27
Rnf20Q5DTM8 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Rnf20Q5DTM8 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC16.75■□□□□ 0.27
Rnf20Q5DTM8 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC16.75■□□□□ 0.27
Rnf20Q5DTM8 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rnf20Q5DTM8 Gm45779-201ENSMUST00000212189 4064 ntBASIC16.75■□□□□ 0.27
Rnf20Q5DTM8 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rnf20Q5DTM8 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rnf20Q5DTM8 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rnf20Q5DTM8 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rnf20Q5DTM8 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Rnf20Q5DTM8 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Rnf20Q5DTM8 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Rnf20Q5DTM8 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rnf20Q5DTM8 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rnf20Q5DTM8 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Rnf20Q5DTM8 Gm8410-201ENSMUST00000117225 605 ntBASIC16.74■□□□□ 0.27
Rnf20Q5DTM8 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC16.74■□□□□ 0.27
Rnf20Q5DTM8 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC16.74■□□□□ 0.27
Rnf20Q5DTM8 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Rnf20Q5DTM8 Gm16476-201ENSMUST00000221544 139 ntBASIC16.74■□□□□ 0.27
Rnf20Q5DTM8 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rnf20Q5DTM8 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rnf20Q5DTM8 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rnf20Q5DTM8 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Rnf20Q5DTM8 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC16.74■□□□□ 0.27
Rnf20Q5DTM8 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rnf20Q5DTM8 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rnf20Q5DTM8 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rnf20Q5DTM8 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Rnf20Q5DTM8 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rnf20Q5DTM8 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rnf20Q5DTM8 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rnf20Q5DTM8 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rnf20Q5DTM8 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rnf20Q5DTM8 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rnf20Q5DTM8 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rnf20Q5DTM8 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rnf20Q5DTM8 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rnf20Q5DTM8 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rnf20Q5DTM8 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rnf20Q5DTM8 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rnf20Q5DTM8 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rnf20Q5DTM8 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Rnf20Q5DTM8 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC16.73■□□□□ 0.27
Rnf20Q5DTM8 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
Rnf20Q5DTM8 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Rnf20Q5DTM8 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Rnf20Q5DTM8 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Rnf20Q5DTM8 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Rnf20Q5DTM8 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rnf20Q5DTM8 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rnf20Q5DTM8 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Rnf20Q5DTM8 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rnf20Q5DTM8 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rnf20Q5DTM8 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rnf20Q5DTM8 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rnf20Q5DTM8 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rnf20Q5DTM8 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Rnf20Q5DTM8 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rnf20Q5DTM8 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rnf20Q5DTM8 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rnf20Q5DTM8 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rnf20Q5DTM8 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Rnf20Q5DTM8 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rnf20Q5DTM8 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
Rnf20Q5DTM8 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
Rnf20Q5DTM8 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Rnf20Q5DTM8 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rnf20Q5DTM8 Gm14701-201ENSMUST00000117156 348 ntBASIC16.72■□□□□ 0.27
Rnf20Q5DTM8 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC16.72■□□□□ 0.27
Rnf20Q5DTM8 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Rnf20Q5DTM8 Gm28630-201ENSMUST00000187806 498 ntBASIC16.72■□□□□ 0.27
Rnf20Q5DTM8 Ighv1-25-201ENSMUST00000195638 345 ntBASIC16.72■□□□□ 0.27
Rnf20Q5DTM8 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC16.72■□□□□ 0.27
Rnf20Q5DTM8 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rnf20Q5DTM8 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Rnf20Q5DTM8 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rnf20Q5DTM8 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rnf20Q5DTM8 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rnf20Q5DTM8 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rnf20Q5DTM8 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Rnf20Q5DTM8 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rnf20Q5DTM8 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rnf20Q5DTM8 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Rnf20Q5DTM8 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rnf20Q5DTM8 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 81.3 ms