Protein–RNA interactions for Protein: Q571C7

Bdp1, Transcription factor TFIIIB component B'' homolog, mousemouse

Predictions only

Length 2,467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Bdp1Q571C7 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Bdp1Q571C7 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Bdp1Q571C7 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Bdp1Q571C7 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Bdp1Q571C7 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Bdp1Q571C7 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Bdp1Q571C7 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Bdp1Q571C7 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC14.16□□□□□ -0.14
Bdp1Q571C7 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Bdp1Q571C7 Gm13886-201ENSMUST00000117876 1183 ntBASIC14.16□□□□□ -0.14
Bdp1Q571C7 Gm8194-201ENSMUST00000159783 859 ntBASIC14.16□□□□□ -0.14
Bdp1Q571C7 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Bdp1Q571C7 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Bdp1Q571C7 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Bdp1Q571C7 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Bdp1Q571C7 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Bdp1Q571C7 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Bdp1Q571C7 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Bdp1Q571C7 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Bdp1Q571C7 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Bdp1Q571C7 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Bdp1Q571C7 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC14.15□□□□□ -0.14
Bdp1Q571C7 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Bdp1Q571C7 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Bdp1Q571C7 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC14.15□□□□□ -0.14
Bdp1Q571C7 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC14.15□□□□□ -0.14
Bdp1Q571C7 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Bdp1Q571C7 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Bdp1Q571C7 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Bdp1Q571C7 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Bdp1Q571C7 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Bdp1Q571C7 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Bdp1Q571C7 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC14.15□□□□□ -0.14
Bdp1Q571C7 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Bdp1Q571C7 1700081H04Rik-201ENSMUST00000190550 1128 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Bdp1Q571C7 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC14.15□□□□□ -0.14
Bdp1Q571C7 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC14.15□□□□□ -0.14
Bdp1Q571C7 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Bdp1Q571C7 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Bdp1Q571C7 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC14.15□□□□□ -0.14
Bdp1Q571C7 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Bdp1Q571C7 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Bdp1Q571C7 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Bdp1Q571C7 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Bdp1Q571C7 AC163637.1-201ENSMUST00000215491 1894 ntBASIC14.15□□□□□ -0.14
Bdp1Q571C7 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Bdp1Q571C7 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Bdp1Q571C7 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Bdp1Q571C7 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Bdp1Q571C7 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Bdp1Q571C7 Mospd4-201ENSMUST00000180618 576 ntBASIC14.15□□□□□ -0.14
Bdp1Q571C7 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Bdp1Q571C7 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Bdp1Q571C7 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Bdp1Q571C7 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Bdp1Q571C7 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Bdp1Q571C7 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Bdp1Q571C7 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Bdp1Q571C7 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Bdp1Q571C7 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Bdp1Q571C7 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Bdp1Q571C7 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Bdp1Q571C7 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Bdp1Q571C7 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Bdp1Q571C7 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Bdp1Q571C7 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Bdp1Q571C7 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Bdp1Q571C7 Gm42473-201ENSMUST00000201056 2291 ntBASIC14.14□□□□□ -0.15
Bdp1Q571C7 Gm12012-201ENSMUST00000118857 1066 ntBASIC14.14□□□□□ -0.15
Bdp1Q571C7 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Bdp1Q571C7 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC14.14□□□□□ -0.15
Bdp1Q571C7 AC122876.1-201ENSMUST00000217619 825 ntBASIC14.14□□□□□ -0.15
Bdp1Q571C7 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Bdp1Q571C7 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Bdp1Q571C7 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Bdp1Q571C7 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Bdp1Q571C7 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC14.14□□□□□ -0.15
Bdp1Q571C7 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Bdp1Q571C7 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Bdp1Q571C7 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Bdp1Q571C7 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Bdp1Q571C7 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Bdp1Q571C7 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Bdp1Q571C7 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC14.14□□□□□ -0.15
Bdp1Q571C7 Gm11618-201ENSMUST00000117946 267 ntBASIC14.14□□□□□ -0.15
Bdp1Q571C7 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Bdp1Q571C7 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Bdp1Q571C7 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Bdp1Q571C7 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Bdp1Q571C7 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Bdp1Q571C7 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Bdp1Q571C7 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Bdp1Q571C7 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Bdp1Q571C7 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Bdp1Q571C7 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Bdp1Q571C7 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC14.13□□□□□ -0.15
Bdp1Q571C7 Gm45219-201ENSMUST00000205602 465 ntBASIC14.13□□□□□ -0.15
Bdp1Q571C7 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Bdp1Q571C7 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Bdp1Q571C7 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms