Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Shank3Q4ACU6 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Shank3Q4ACU6 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Shank3Q4ACU6 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Shank3Q4ACU6 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Shank3Q4ACU6 Gm5363-201ENSMUST00000211927 938 ntBASIC17.1■□□□□ 0.33
Shank3Q4ACU6 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Shank3Q4ACU6 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Shank3Q4ACU6 Gm18244-201ENSMUST00000219747 1566 ntBASIC17.09■□□□□ 0.33
Shank3Q4ACU6 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Shank3Q4ACU6 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Shank3Q4ACU6 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC17.09■□□□□ 0.33
Shank3Q4ACU6 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Shank3Q4ACU6 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC17.09■□□□□ 0.33
Shank3Q4ACU6 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Shank3Q4ACU6 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Shank3Q4ACU6 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Shank3Q4ACU6 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Shank3Q4ACU6 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Shank3Q4ACU6 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Shank3Q4ACU6 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Shank3Q4ACU6 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC17.09■□□□□ 0.33
Shank3Q4ACU6 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC17.09■□□□□ 0.33
Shank3Q4ACU6 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC17.09■□□□□ 0.33
Shank3Q4ACU6 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Shank3Q4ACU6 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Shank3Q4ACU6 Gm16372-201ENSMUST00000073088 450 ntBASIC17.09■□□□□ 0.33
Shank3Q4ACU6 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Shank3Q4ACU6 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC17.09■□□□□ 0.33
Shank3Q4ACU6 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Shank3Q4ACU6 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Shank3Q4ACU6 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Shank3Q4ACU6 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Shank3Q4ACU6 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Shank3Q4ACU6 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC17.08■□□□□ 0.33
Shank3Q4ACU6 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Shank3Q4ACU6 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Shank3Q4ACU6 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Shank3Q4ACU6 Gm22902-201ENSMUST00000158488 302 ntBASIC17.08■□□□□ 0.32
Shank3Q4ACU6 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Shank3Q4ACU6 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC17.08■□□□□ 0.32
Shank3Q4ACU6 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC17.08■□□□□ 0.32
Shank3Q4ACU6 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC17.08■□□□□ 0.32
Shank3Q4ACU6 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Shank3Q4ACU6 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Shank3Q4ACU6 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Shank3Q4ACU6 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Shank3Q4ACU6 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Shank3Q4ACU6 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Shank3Q4ACU6 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Shank3Q4ACU6 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Shank3Q4ACU6 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Shank3Q4ACU6 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Shank3Q4ACU6 Gm43579-201ENSMUST00000202387 1307 ntBASIC17.08■□□□□ 0.32
Shank3Q4ACU6 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Shank3Q4ACU6 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Shank3Q4ACU6 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Shank3Q4ACU6 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Shank3Q4ACU6 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Shank3Q4ACU6 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC17.07■□□□□ 0.32
Shank3Q4ACU6 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
Shank3Q4ACU6 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Shank3Q4ACU6 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC17.07■□□□□ 0.32
Shank3Q4ACU6 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Shank3Q4ACU6 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Shank3Q4ACU6 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Shank3Q4ACU6 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Shank3Q4ACU6 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Shank3Q4ACU6 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
Shank3Q4ACU6 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Shank3Q4ACU6 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Shank3Q4ACU6 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Shank3Q4ACU6 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Shank3Q4ACU6 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Shank3Q4ACU6 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC17.07■□□□□ 0.32
Shank3Q4ACU6 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Shank3Q4ACU6 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Shank3Q4ACU6 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Shank3Q4ACU6 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC17.07■□□□□ 0.32
Shank3Q4ACU6 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Shank3Q4ACU6 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Shank3Q4ACU6 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
Shank3Q4ACU6 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Shank3Q4ACU6 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC17.07■□□□□ 0.32
Shank3Q4ACU6 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC17.07■□□□□ 0.32
Shank3Q4ACU6 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Shank3Q4ACU6 Gm28693-202ENSMUST00000190758 331 ntBASIC17.07■□□□□ 0.32
Shank3Q4ACU6 Gm38144-201ENSMUST00000192790 465 ntBASIC17.07■□□□□ 0.32
Shank3Q4ACU6 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Shank3Q4ACU6 Gm44069-201ENSMUST00000204898 506 ntBASIC17.07■□□□□ 0.32
Shank3Q4ACU6 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
Shank3Q4ACU6 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Shank3Q4ACU6 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Shank3Q4ACU6 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Shank3Q4ACU6 Gm43289-201ENSMUST00000200537 1475 ntBASIC17.07■□□□□ 0.32
Shank3Q4ACU6 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.06■□□□□ 0.32
Shank3Q4ACU6 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Shank3Q4ACU6 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Shank3Q4ACU6 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Shank3Q4ACU6 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms