Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim43aQ3TL54 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim43aQ3TL54 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trim43aQ3TL54 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim43aQ3TL54 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim43aQ3TL54 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim43aQ3TL54 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim43aQ3TL54 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trim43aQ3TL54 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim43aQ3TL54 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trim43aQ3TL54 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim43aQ3TL54 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trim43aQ3TL54 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trim43aQ3TL54 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim43aQ3TL54 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim43aQ3TL54 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim43aQ3TL54 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trim43aQ3TL54 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim43aQ3TL54 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
Trim43aQ3TL54 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trim43aQ3TL54 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC14.91□□□□□ -0.02
Trim43aQ3TL54 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trim43aQ3TL54 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trim43aQ3TL54 Gm6736-201ENSMUST00000166583 948 ntBASIC14.91□□□□□ -0.02
Trim43aQ3TL54 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC14.91□□□□□ -0.02
Trim43aQ3TL54 Gm5177-201ENSMUST00000183092 997 ntBASIC14.91□□□□□ -0.02
Trim43aQ3TL54 Gm27301-201ENSMUST00000184012 127 ntBASIC14.91□□□□□ -0.02
Trim43aQ3TL54 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trim43aQ3TL54 Klk2-ps-201ENSMUST00000205342 571 ntBASIC14.91□□□□□ -0.02
Trim43aQ3TL54 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim43aQ3TL54 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim43aQ3TL54 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Trim43aQ3TL54 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Trim43aQ3TL54 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Trim43aQ3TL54 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC14.91□□□□□ -0.02
Trim43aQ3TL54 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC14.91□□□□□ -0.02
Trim43aQ3TL54 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC14.91□□□□□ -0.02
Trim43aQ3TL54 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Trim43aQ3TL54 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim43aQ3TL54 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim43aQ3TL54 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim43aQ3TL54 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trim43aQ3TL54 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC14.9□□□□□ -0.02
Trim43aQ3TL54 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Trim43aQ3TL54 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim43aQ3TL54 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim43aQ3TL54 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim43aQ3TL54 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trim43aQ3TL54 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim43aQ3TL54 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Trim43aQ3TL54 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim43aQ3TL54 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim43aQ3TL54 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC14.9□□□□□ -0.02
Trim43aQ3TL54 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC14.9□□□□□ -0.02
Trim43aQ3TL54 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC14.9□□□□□ -0.02
Trim43aQ3TL54 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC14.9□□□□□ -0.02
Trim43aQ3TL54 Gm15483-201ENSMUST00000120338 456 ntBASIC14.9□□□□□ -0.02
Trim43aQ3TL54 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC14.9□□□□□ -0.02
Trim43aQ3TL54 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC14.9□□□□□ -0.02
Trim43aQ3TL54 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC14.9□□□□□ -0.02
Trim43aQ3TL54 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC14.9□□□□□ -0.02
Trim43aQ3TL54 AC174742.1-201ENSMUST00000218272 304 ntBASIC14.9□□□□□ -0.02
Trim43aQ3TL54 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim43aQ3TL54 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim43aQ3TL54 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim43aQ3TL54 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim43aQ3TL54 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim43aQ3TL54 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim43aQ3TL54 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC14.9□□□□□ -0.02
Trim43aQ3TL54 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim43aQ3TL54 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trim43aQ3TL54 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim43aQ3TL54 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC14.9□□□□□ -0.02
Trim43aQ3TL54 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim43aQ3TL54 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim43aQ3TL54 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim43aQ3TL54 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim43aQ3TL54 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim43aQ3TL54 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trim43aQ3TL54 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim43aQ3TL54 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trim43aQ3TL54 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Trim43aQ3TL54 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
Trim43aQ3TL54 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trim43aQ3TL54 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim43aQ3TL54 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim43aQ3TL54 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim43aQ3TL54 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trim43aQ3TL54 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim43aQ3TL54 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim43aQ3TL54 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Trim43aQ3TL54 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim43aQ3TL54 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC14.89□□□□□ -0.03
Trim43aQ3TL54 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim43aQ3TL54 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC14.89□□□□□ -0.03
Trim43aQ3TL54 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Trim43aQ3TL54 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim43aQ3TL54 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
Trim43aQ3TL54 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim43aQ3TL54 Gm11594-201ENSMUST00000122313 162 ntBASIC14.89□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms