Protein–RNA interactions for Protein: Q00420

Gabpb1, GA-binding protein subunit beta-1, mousemouse

Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gabpb1Q00420 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC14.28□□□□□ -0.12
Gabpb1Q00420 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gabpb1Q00420 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gabpb1Q00420 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gabpb1Q00420 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gabpb1Q00420 Gm42769-201ENSMUST00000198576 1659 ntBASIC14.28□□□□□ -0.12
Gabpb1Q00420 Gm7774-201ENSMUST00000200064 533 ntBASIC14.28□□□□□ -0.12
Gabpb1Q00420 Dupd1-202ENSMUST00000224735 548 ntBASIC14.28□□□□□ -0.12
Gabpb1Q00420 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gabpb1Q00420 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gabpb1Q00420 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Gabpb1Q00420 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Gabpb1Q00420 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gabpb1Q00420 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Gabpb1Q00420 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gabpb1Q00420 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gabpb1Q00420 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
Gabpb1Q00420 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gabpb1Q00420 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Gabpb1Q00420 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Gabpb1Q00420 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Gabpb1Q00420 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Gabpb1Q00420 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Gabpb1Q00420 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Gabpb1Q00420 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Gabpb1Q00420 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC14.27□□□□□ -0.12
Gabpb1Q00420 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Gabpb1Q00420 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Gabpb1Q00420 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.12
Gabpb1Q00420 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC14.27□□□□□ -0.12
Gabpb1Q00420 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC14.27□□□□□ -0.12
Gabpb1Q00420 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Gabpb1Q00420 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Gabpb1Q00420 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Gabpb1Q00420 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Gabpb1Q00420 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Gabpb1Q00420 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Gabpb1Q00420 Gm24543-201ENSMUST00000103867 82 ntBASIC14.27□□□□□ -0.13
Gabpb1Q00420 Mir449b-201ENSMUST00000104833 80 ntBASIC14.27□□□□□ -0.13
Gabpb1Q00420 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Gabpb1Q00420 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Gabpb1Q00420 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Gabpb1Q00420 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Gabpb1Q00420 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC14.27□□□□□ -0.13
Gabpb1Q00420 Ighv1-25-201ENSMUST00000195638 345 ntBASIC14.27□□□□□ -0.13
Gabpb1Q00420 CT030704.2-201ENSMUST00000228887 494 ntBASIC14.27□□□□□ -0.13
Gabpb1Q00420 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Gabpb1Q00420 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Gabpb1Q00420 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
Gabpb1Q00420 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Gabpb1Q00420 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Gabpb1Q00420 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Gabpb1Q00420 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Gabpb1Q00420 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Gabpb1Q00420 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Gabpb1Q00420 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Gabpb1Q00420 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Gabpb1Q00420 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Gabpb1Q00420 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Gabpb1Q00420 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gabpb1Q00420 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Gabpb1Q00420 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gabpb1Q00420 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Gabpb1Q00420 AC166491.1-201ENSMUST00000227053 2308 ntBASIC14.26□□□□□ -0.13
Gabpb1Q00420 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gabpb1Q00420 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Gabpb1Q00420 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
Gabpb1Q00420 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Gabpb1Q00420 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gabpb1Q00420 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gabpb1Q00420 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC14.26□□□□□ -0.13
Gabpb1Q00420 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Gabpb1Q00420 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC14.26□□□□□ -0.13
Gabpb1Q00420 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC14.26□□□□□ -0.13
Gabpb1Q00420 Gm5779-201ENSMUST00000218467 910 ntBASIC14.26□□□□□ -0.13
Gabpb1Q00420 Gm18027-201ENSMUST00000218947 619 ntBASIC14.26□□□□□ -0.13
Gabpb1Q00420 AC121804.3-201ENSMUST00000223420 295 ntBASIC14.26□□□□□ -0.13
Gabpb1Q00420 Gm8396-201ENSMUST00000057361 823 ntBASIC14.26□□□□□ -0.13
Gabpb1Q00420 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Gabpb1Q00420 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gabpb1Q00420 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gabpb1Q00420 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gabpb1Q00420 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC14.26□□□□□ -0.13
Gabpb1Q00420 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC14.26□□□□□ -0.13
Gabpb1Q00420 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gabpb1Q00420 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Gabpb1Q00420 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gabpb1Q00420 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gabpb1Q00420 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gabpb1Q00420 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Gabpb1Q00420 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Gabpb1Q00420 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Gabpb1Q00420 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Gabpb1Q00420 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gabpb1Q00420 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gabpb1Q00420 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gabpb1Q00420 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gabpb1Q00420 Gm45667-201ENSMUST00000210380 1316 ntBASIC14.25□□□□□ -0.13
Gabpb1Q00420 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Gabpb1Q00420 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms