Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nkx3-2P97503 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx3-2P97503 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Nkx3-2P97503 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx3-2P97503 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx3-2P97503 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx3-2P97503 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx3-2P97503 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx3-2P97503 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Nkx3-2P97503 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Nkx3-2P97503 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx3-2P97503 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx3-2P97503 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx3-2P97503 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC13.29□□□□□ -0.28
Nkx3-2P97503 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx3-2P97503 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
Nkx3-2P97503 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx3-2P97503 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC13.29□□□□□ -0.28
Nkx3-2P97503 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx3-2P97503 Gm29667-201ENSMUST00000190817 490 ntBASIC13.29□□□□□ -0.28
Nkx3-2P97503 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx3-2P97503 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Nkx3-2P97503 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx3-2P97503 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx3-2P97503 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx3-2P97503 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx3-2P97503 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC13.29□□□□□ -0.28
Nkx3-2P97503 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx3-2P97503 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx3-2P97503 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx3-2P97503 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Nkx3-2P97503 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx3-2P97503 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx3-2P97503 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx3-2P97503 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx3-2P97503 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx3-2P97503 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Nkx3-2P97503 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx3-2P97503 Ankra2-208ENSMUST00000226100 1476 ntBASIC13.29□□□□□ -0.28
Nkx3-2P97503 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx3-2P97503 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx3-2P97503 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Nkx3-2P97503 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx3-2P97503 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx3-2P97503 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx3-2P97503 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx3-2P97503 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx3-2P97503 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx3-2P97503 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx3-2P97503 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx3-2P97503 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx3-2P97503 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx3-2P97503 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Nkx3-2P97503 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
Nkx3-2P97503 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx3-2P97503 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx3-2P97503 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx3-2P97503 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx3-2P97503 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC13.28□□□□□ -0.28
Nkx3-2P97503 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC13.28□□□□□ -0.28
Nkx3-2P97503 Gm12882-201ENSMUST00000121696 517 ntBASIC13.28□□□□□ -0.28
Nkx3-2P97503 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx3-2P97503 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC13.28□□□□□ -0.28
Nkx3-2P97503 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx3-2P97503 Gm16215-201ENSMUST00000161990 637 ntBASIC13.28□□□□□ -0.28
Nkx3-2P97503 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx3-2P97503 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Nkx3-2P97503 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC13.28□□□□□ -0.28
Nkx3-2P97503 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Nkx3-2P97503 AC121804.3-201ENSMUST00000223420 295 ntBASIC13.28□□□□□ -0.28
Nkx3-2P97503 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx3-2P97503 Gm2423-201ENSMUST00000074863 733 ntBASIC13.28□□□□□ -0.28
Nkx3-2P97503 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Nkx3-2P97503 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Nkx3-2P97503 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx3-2P97503 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Nkx3-2P97503 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx3-2P97503 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx3-2P97503 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx3-2P97503 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx3-2P97503 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx3-2P97503 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx3-2P97503 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx3-2P97503 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Nkx3-2P97503 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx3-2P97503 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx3-2P97503 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC13.28□□□□□ -0.28
Nkx3-2P97503 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx3-2P97503 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Nkx3-2P97503 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx3-2P97503 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx3-2P97503 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx3-2P97503 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx3-2P97503 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.28
Nkx3-2P97503 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Nkx3-2P97503 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Nkx3-2P97503 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Nkx3-2P97503 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Nkx3-2P97503 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Nkx3-2P97503 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 11.7 ms