Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim43cP86449 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Trim43cP86449 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim43cP86449 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Trim43cP86449 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Trim43cP86449 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim43cP86449 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim43cP86449 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim43cP86449 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim43cP86449 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim43cP86449 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC15.27■□□□□ 0.04
Trim43cP86449 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim43cP86449 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trim43cP86449 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trim43cP86449 Gm14767-201ENSMUST00000121559 586 ntBASIC15.27■□□□□ 0.04
Trim43cP86449 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC15.27■□□□□ 0.04
Trim43cP86449 Mir6956-201ENSMUST00000183598 62 ntBASIC15.27■□□□□ 0.04
Trim43cP86449 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC15.27■□□□□ 0.04
Trim43cP86449 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC15.27■□□□□ 0.04
Trim43cP86449 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trim43cP86449 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Trim43cP86449 Mir497b-201ENSMUST00000093601 125 ntBASIC15.27■□□□□ 0.04
Trim43cP86449 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trim43cP86449 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
Trim43cP86449 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.03
Trim43cP86449 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trim43cP86449 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Trim43cP86449 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trim43cP86449 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC15.27■□□□□ 0.03
Trim43cP86449 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trim43cP86449 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Trim43cP86449 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Trim43cP86449 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Trim43cP86449 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trim43cP86449 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC15.27■□□□□ 0.03
Trim43cP86449 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trim43cP86449 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim43cP86449 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Trim43cP86449 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Trim43cP86449 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim43cP86449 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trim43cP86449 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim43cP86449 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim43cP86449 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim43cP86449 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim43cP86449 Gm17837-201ENSMUST00000186435 985 ntBASIC15.26■□□□□ 0.03
Trim43cP86449 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC15.26■□□□□ 0.03
Trim43cP86449 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim43cP86449 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim43cP86449 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim43cP86449 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim43cP86449 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim43cP86449 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC15.26■□□□□ 0.03
Trim43cP86449 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim43cP86449 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim43cP86449 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trim43cP86449 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim43cP86449 AC166491.1-201ENSMUST00000227053 2308 ntBASIC15.26■□□□□ 0.03
Trim43cP86449 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim43cP86449 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trim43cP86449 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
Trim43cP86449 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim43cP86449 Gm42872-201ENSMUST00000200026 1967 ntBASIC15.25■□□□□ 0.03
Trim43cP86449 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim43cP86449 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim43cP86449 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim43cP86449 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim43cP86449 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim43cP86449 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim43cP86449 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trim43cP86449 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trim43cP86449 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim43cP86449 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim43cP86449 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC15.25■□□□□ 0.03
Trim43cP86449 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim43cP86449 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trim43cP86449 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim43cP86449 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC15.25■□□□□ 0.03
Trim43cP86449 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Trim43cP86449 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim43cP86449 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim43cP86449 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim43cP86449 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim43cP86449 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trim43cP86449 CT025610.1-201ENSMUST00000224552 1786 ntBASIC15.25■□□□□ 0.03
Trim43cP86449 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Trim43cP86449 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim43cP86449 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim43cP86449 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trim43cP86449 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim43cP86449 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC15.25■□□□□ 0.03
Trim43cP86449 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim43cP86449 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim43cP86449 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim43cP86449 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
Trim43cP86449 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim43cP86449 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim43cP86449 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim43cP86449 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Trim43cP86449 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms