Protein–RNA interactions for Protein: P84228

Hist1h3b, Histone H3.2, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h3bP84228 Gm42471-201ENSMUST00000201457 1865 ntBASIC12.38□□□□□ -0.43
Hist1h3bP84228 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hist1h3bP84228 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Hist1h3bP84228 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hist1h3bP84228 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Hist1h3bP84228 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Hist1h3bP84228 AC166574.6-201ENSMUST00000227889 1806 ntBASIC12.37□□□□□ -0.43
Hist1h3bP84228 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hist1h3bP84228 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Hist1h3bP84228 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hist1h3bP84228 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hist1h3bP84228 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Hist1h3bP84228 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC12.37□□□□□ -0.43
Hist1h3bP84228 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC12.37□□□□□ -0.43
Hist1h3bP84228 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hist1h3bP84228 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hist1h3bP84228 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Hist1h3bP84228 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Hist1h3bP84228 Gm27631-201ENSMUST00000184163 466 ntBASIC12.37□□□□□ -0.43
Hist1h3bP84228 AC151286.1-201ENSMUST00000198489 145 ntBASIC12.37□□□□□ -0.43
Hist1h3bP84228 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Hist1h3bP84228 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC12.37□□□□□ -0.43
Hist1h3bP84228 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hist1h3bP84228 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hist1h3bP84228 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hist1h3bP84228 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hist1h3bP84228 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hist1h3bP84228 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Hist1h3bP84228 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Hist1h3bP84228 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC12.37□□□□□ -0.43
Hist1h3bP84228 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hist1h3bP84228 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hist1h3bP84228 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hist1h3bP84228 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hist1h3bP84228 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Hist1h3bP84228 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Hist1h3bP84228 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC12.37□□□□□ -0.43
Hist1h3bP84228 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hist1h3bP84228 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hist1h3bP84228 AC121805.2-201ENSMUST00000218808 2538 ntBASIC12.37□□□□□ -0.43
Hist1h3bP84228 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hist1h3bP84228 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Hist1h3bP84228 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
Hist1h3bP84228 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hist1h3bP84228 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC12.37□□□□□ -0.43
Hist1h3bP84228 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hist1h3bP84228 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC12.36□□□□□ -0.43
Hist1h3bP84228 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hist1h3bP84228 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hist1h3bP84228 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hist1h3bP84228 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hist1h3bP84228 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hist1h3bP84228 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hist1h3bP84228 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hist1h3bP84228 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Hist1h3bP84228 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC12.36□□□□□ -0.43
Hist1h3bP84228 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hist1h3bP84228 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hist1h3bP84228 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Hist1h3bP84228 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
Hist1h3bP84228 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Hist1h3bP84228 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hist1h3bP84228 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC12.36□□□□□ -0.43
Hist1h3bP84228 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Hist1h3bP84228 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hist1h3bP84228 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Hist1h3bP84228 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC12.36□□□□□ -0.43
Hist1h3bP84228 Gm45453-201ENSMUST00000211758 853 ntBASIC12.36□□□□□ -0.43
Hist1h3bP84228 AC149588.3-201ENSMUST00000227515 150 ntBASIC12.36□□□□□ -0.43
Hist1h3bP84228 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hist1h3bP84228 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Hist1h3bP84228 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hist1h3bP84228 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hist1h3bP84228 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Hist1h3bP84228 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Hist1h3bP84228 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Hist1h3bP84228 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hist1h3bP84228 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC12.36□□□□□ -0.43
Hist1h3bP84228 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Hist1h3bP84228 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hist1h3bP84228 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC12.36□□□□□ -0.43
Hist1h3bP84228 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Hist1h3bP84228 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Hist1h3bP84228 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hist1h3bP84228 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hist1h3bP84228 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hist1h3bP84228 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hist1h3bP84228 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hist1h3bP84228 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hist1h3bP84228 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Hist1h3bP84228 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hist1h3bP84228 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hist1h3bP84228 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hist1h3bP84228 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hist1h3bP84228 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hist1h3bP84228 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Hist1h3bP84228 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hist1h3bP84228 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Hist1h3bP84228 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Hist1h3bP84228 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms