Protein–RNA interactions for Protein: P48437

Prox1, Prospero homeobox protein 1, mousemouse

Predictions only

Length 737 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prox1P48437 Gm13036-201ENSMUST00000117799 748 ntBASIC13.51□□□□□ -0.25
Prox1P48437 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Prox1P48437 Gm6944-201ENSMUST00000182449 1006 ntBASIC13.51□□□□□ -0.25
Prox1P48437 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC13.51□□□□□ -0.25
Prox1P48437 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Prox1P48437 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC13.51□□□□□ -0.25
Prox1P48437 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Prox1P48437 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Prox1P48437 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Prox1P48437 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Prox1P48437 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Prox1P48437 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Prox1P48437 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Prox1P48437 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Prox1P48437 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Prox1P48437 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Prox1P48437 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Prox1P48437 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Prox1P48437 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Prox1P48437 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Prox1P48437 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Prox1P48437 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Prox1P48437 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Prox1P48437 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Prox1P48437 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC13.5□□□□□ -0.25
Prox1P48437 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Prox1P48437 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Prox1P48437 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Prox1P48437 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Prox1P48437 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC13.5□□□□□ -0.25
Prox1P48437 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Prox1P48437 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Prox1P48437 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Prox1P48437 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Prox1P48437 Gm14042-201ENSMUST00000120139 833 ntBASIC13.5□□□□□ -0.25
Prox1P48437 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Prox1P48437 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC13.5□□□□□ -0.25
Prox1P48437 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Prox1P48437 Gm8597-201ENSMUST00000191525 1109 ntBASIC13.5□□□□□ -0.25
Prox1P48437 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC13.5□□□□□ -0.25
Prox1P48437 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC13.5□□□□□ -0.25
Prox1P48437 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC13.5□□□□□ -0.25
Prox1P48437 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Prox1P48437 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Prox1P48437 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Prox1P48437 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Prox1P48437 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Prox1P48437 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Prox1P48437 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Prox1P48437 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Prox1P48437 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
Prox1P48437 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Prox1P48437 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Prox1P48437 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Prox1P48437 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Prox1P48437 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Prox1P48437 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Prox1P48437 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Prox1P48437 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Prox1P48437 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Prox1P48437 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Prox1P48437 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Prox1P48437 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Prox1P48437 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Prox1P48437 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
Prox1P48437 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Prox1P48437 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Prox1P48437 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Prox1P48437 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Prox1P48437 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Prox1P48437 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Prox1P48437 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC13.49□□□□□ -0.25
Prox1P48437 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Prox1P48437 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Prox1P48437 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Prox1P48437 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Prox1P48437 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Prox1P48437 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Prox1P48437 Gm1401-201ENSMUST00000122048 772 ntBASIC13.49□□□□□ -0.25
Prox1P48437 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
Prox1P48437 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Prox1P48437 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC13.49□□□□□ -0.25
Prox1P48437 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC13.49□□□□□ -0.25
Prox1P48437 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Prox1P48437 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC13.49□□□□□ -0.25
Prox1P48437 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC13.49□□□□□ -0.25
Prox1P48437 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Prox1P48437 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Prox1P48437 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC13.49□□□□□ -0.25
Prox1P48437 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Prox1P48437 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Prox1P48437 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
Prox1P48437 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Prox1P48437 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Prox1P48437 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC13.49□□□□□ -0.25
Prox1P48437 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Prox1P48437 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Prox1P48437 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Prox1P48437 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC13.49□□□□□ -0.25
Prox1P48437 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms