Protein–RNA interactions for Protein: P48030

Tgfa, Protransforming growth factor alpha, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TgfaP48030 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
TgfaP48030 Gm24644-201ENSMUST00000157114 139 ntBASIC12.16□□□□□ -0.46
TgfaP48030 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC12.16□□□□□ -0.46
TgfaP48030 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC12.16□□□□□ -0.46
TgfaP48030 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TgfaP48030 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TgfaP48030 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
TgfaP48030 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TgfaP48030 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
TgfaP48030 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC12.16□□□□□ -0.46
TgfaP48030 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TgfaP48030 Gm9867-201ENSMUST00000192212 2647 ntBASIC12.16□□□□□ -0.46
TgfaP48030 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
TgfaP48030 Gm21038-201ENSMUST00000222205 1383 ntBASIC12.16□□□□□ -0.46
TgfaP48030 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TgfaP48030 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
TgfaP48030 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
TgfaP48030 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TgfaP48030 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
TgfaP48030 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
TgfaP48030 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC12.16□□□□□ -0.46
TgfaP48030 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TgfaP48030 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
TgfaP48030 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TgfaP48030 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
TgfaP48030 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC12.15□□□□□ -0.46
TgfaP48030 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
TgfaP48030 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
TgfaP48030 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
TgfaP48030 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
TgfaP48030 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TgfaP48030 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TgfaP48030 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
TgfaP48030 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
TgfaP48030 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
TgfaP48030 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
TgfaP48030 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TgfaP48030 Gm45212-201ENSMUST00000205831 3403 ntBASIC12.15□□□□□ -0.46
TgfaP48030 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC12.15□□□□□ -0.46
TgfaP48030 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TgfaP48030 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
TgfaP48030 Gm13612-201ENSMUST00000119276 390 ntBASIC12.15□□□□□ -0.46
TgfaP48030 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC12.15□□□□□ -0.46
TgfaP48030 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TgfaP48030 Gm2639-201ENSMUST00000156881 1297 ntBASIC12.15□□□□□ -0.46
TgfaP48030 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
TgfaP48030 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
TgfaP48030 Gm6013-201ENSMUST00000212264 699 ntBASIC12.15□□□□□ -0.46
TgfaP48030 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC12.15□□□□□ -0.46
TgfaP48030 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TgfaP48030 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TgfaP48030 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
TgfaP48030 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
TgfaP48030 AC148324.1-201ENSMUST00000219034 4240 ntBASIC12.15□□□□□ -0.46
TgfaP48030 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TgfaP48030 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
TgfaP48030 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
TgfaP48030 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
TgfaP48030 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
TgfaP48030 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
TgfaP48030 Gm37015-201ENSMUST00000192763 1521 ntBASIC12.15□□□□□ -0.46
TgfaP48030 Dctn4-202ENSMUST00000223590 1530 ntBASIC12.15□□□□□ -0.46
TgfaP48030 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TgfaP48030 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
TgfaP48030 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TgfaP48030 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
TgfaP48030 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
TgfaP48030 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
TgfaP48030 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC12.15□□□□□ -0.47
TgfaP48030 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC12.15□□□□□ -0.47
TgfaP48030 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
TgfaP48030 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
TgfaP48030 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TgfaP48030 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TgfaP48030 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
TgfaP48030 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TgfaP48030 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
TgfaP48030 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TgfaP48030 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC12.14□□□□□ -0.47
TgfaP48030 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TgfaP48030 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TgfaP48030 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
TgfaP48030 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
TgfaP48030 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC12.14□□□□□ -0.47
TgfaP48030 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
TgfaP48030 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC12.14□□□□□ -0.47
TgfaP48030 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TgfaP48030 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TgfaP48030 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC12.14□□□□□ -0.47
TgfaP48030 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
TgfaP48030 Gm5187-201ENSMUST00000117317 991 ntBASIC12.14□□□□□ -0.47
TgfaP48030 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC12.14□□□□□ -0.47
TgfaP48030 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC12.14□□□□□ -0.47
TgfaP48030 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC12.14□□□□□ -0.47
TgfaP48030 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC12.14□□□□□ -0.47
TgfaP48030 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC12.14□□□□□ -0.47
TgfaP48030 Gm24196-201ENSMUST00000179161 110 ntBASIC12.14□□□□□ -0.47
TgfaP48030 Ighv1-51-201ENSMUST00000192903 354 ntBASIC12.14□□□□□ -0.47
TgfaP48030 Gm38223-201ENSMUST00000194484 695 ntBASIC12.14□□□□□ -0.47
TgfaP48030 Gm44397-201ENSMUST00000195950 113 ntBASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms