Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx2-2P42586 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx2-2P42586 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx2-2P42586 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx2-2P42586 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx2-2P42586 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx2-2P42586 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx2-2P42586 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx2-2P42586 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx2-2P42586 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx2-2P42586 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx2-2P42586 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC12.88□□□□□ -0.35
Nkx2-2P42586 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx2-2P42586 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx2-2P42586 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx2-2P42586 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx2-2P42586 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Nkx2-2P42586 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx2-2P42586 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx2-2P42586 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx2-2P42586 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Nkx2-2P42586 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx2-2P42586 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx2-2P42586 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Nkx2-2P42586 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx2-2P42586 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Nkx2-2P42586 Mir6956-201ENSMUST00000183598 62 ntBASIC12.88□□□□□ -0.35
Nkx2-2P42586 Gm21470-201ENSMUST00000187680 696 ntBASIC12.88□□□□□ -0.35
Nkx2-2P42586 Gm43703-201ENSMUST00000200523 763 ntBASIC12.88□□□□□ -0.35
Nkx2-2P42586 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC12.88□□□□□ -0.35
Nkx2-2P42586 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx2-2P42586 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx2-2P42586 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx2-2P42586 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC12.88□□□□□ -0.35
Nkx2-2P42586 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Nkx2-2P42586 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Nkx2-2P42586 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Nkx2-2P42586 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx2-2P42586 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx2-2P42586 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx2-2P42586 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx2-2P42586 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx2-2P42586 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx2-2P42586 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx2-2P42586 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx2-2P42586 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx2-2P42586 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx2-2P42586 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx2-2P42586 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx2-2P42586 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx2-2P42586 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Nkx2-2P42586 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx2-2P42586 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC12.87□□□□□ -0.35
Nkx2-2P42586 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC12.87□□□□□ -0.35
Nkx2-2P42586 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
Nkx2-2P42586 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Nkx2-2P42586 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx2-2P42586 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Nkx2-2P42586 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx2-2P42586 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC12.87□□□□□ -0.35
Nkx2-2P42586 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC12.87□□□□□ -0.35
Nkx2-2P42586 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC12.87□□□□□ -0.35
Nkx2-2P42586 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx2-2P42586 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx2-2P42586 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx2-2P42586 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx2-2P42586 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx2-2P42586 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC12.87□□□□□ -0.35
Nkx2-2P42586 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx2-2P42586 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC12.87□□□□□ -0.35
Nkx2-2P42586 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx2-2P42586 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx2-2P42586 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx2-2P42586 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx2-2P42586 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx2-2P42586 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx2-2P42586 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC12.86□□□□□ -0.35
Nkx2-2P42586 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC12.86□□□□□ -0.35
Nkx2-2P42586 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Nkx2-2P42586 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC12.86□□□□□ -0.35
Nkx2-2P42586 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx2-2P42586 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx2-2P42586 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Nkx2-2P42586 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Nkx2-2P42586 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx2-2P42586 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx2-2P42586 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx2-2P42586 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx2-2P42586 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx2-2P42586 Gm15393-201ENSMUST00000120499 219 ntBASIC12.86□□□□□ -0.35
Nkx2-2P42586 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx2-2P42586 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC12.86□□□□□ -0.35
Nkx2-2P42586 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC12.86□□□□□ -0.35
Nkx2-2P42586 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Nkx2-2P42586 Ighv1-51-201ENSMUST00000192903 354 ntBASIC12.86□□□□□ -0.35
Nkx2-2P42586 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC12.86□□□□□ -0.35
Nkx2-2P42586 Gm7775-201ENSMUST00000218871 853 ntBASIC12.86□□□□□ -0.35
Nkx2-2P42586 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx2-2P42586 Gm9063-201ENSMUST00000223299 582 ntBASIC12.86□□□□□ -0.35
Nkx2-2P42586 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms