Protein–RNA interactions for Protein: P42580

Nkx1-2, NK1 transcription factor-related protein 2, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-2P42580 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nkx1-2P42580 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nkx1-2P42580 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nkx1-2P42580 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Nkx1-2P42580 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Nkx1-2P42580 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC17.28■□□□□ 0.36
Nkx1-2P42580 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nkx1-2P42580 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Nkx1-2P42580 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nkx1-2P42580 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nkx1-2P42580 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
Nkx1-2P42580 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nkx1-2P42580 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Nkx1-2P42580 Gm42466-201ENSMUST00000202099 1301 ntBASIC17.27■□□□□ 0.36
Nkx1-2P42580 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nkx1-2P42580 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nkx1-2P42580 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Nkx1-2P42580 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nkx1-2P42580 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC17.27■□□□□ 0.36
Nkx1-2P42580 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC17.27■□□□□ 0.36
Nkx1-2P42580 Gm12882-201ENSMUST00000121696 517 ntBASIC17.27■□□□□ 0.36
Nkx1-2P42580 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Nkx1-2P42580 Gm18737-201ENSMUST00000173594 937 ntBASIC17.27■□□□□ 0.36
Nkx1-2P42580 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC17.27■□□□□ 0.36
Nkx1-2P42580 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nkx1-2P42580 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Nkx1-2P42580 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nkx1-2P42580 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Nkx1-2P42580 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nkx1-2P42580 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Nkx1-2P42580 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
Nkx1-2P42580 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Nkx1-2P42580 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Nkx1-2P42580 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
Nkx1-2P42580 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Nkx1-2P42580 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC17.27■□□□□ 0.35
Nkx1-2P42580 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Nkx1-2P42580 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Nkx1-2P42580 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Nkx1-2P42580 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC17.26■□□□□ 0.35
Nkx1-2P42580 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nkx1-2P42580 Gm7002-201ENSMUST00000221386 2165 ntBASIC17.26■□□□□ 0.35
Nkx1-2P42580 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nkx1-2P42580 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
Nkx1-2P42580 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC17.26■□□□□ 0.35
Nkx1-2P42580 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC17.26■□□□□ 0.35
Nkx1-2P42580 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Nkx1-2P42580 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Nkx1-2P42580 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nkx1-2P42580 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nkx1-2P42580 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nkx1-2P42580 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nkx1-2P42580 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC17.26■□□□□ 0.35
Nkx1-2P42580 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC17.26■□□□□ 0.35
Nkx1-2P42580 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nkx1-2P42580 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nkx1-2P42580 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nkx1-2P42580 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nkx1-2P42580 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nkx1-2P42580 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Nkx1-2P42580 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nkx1-2P42580 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Nkx1-2P42580 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nkx1-2P42580 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nkx1-2P42580 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nkx1-2P42580 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nkx1-2P42580 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nkx1-2P42580 Gm13332-201ENSMUST00000120451 1398 ntBASIC17.26■□□□□ 0.35
Nkx1-2P42580 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nkx1-2P42580 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nkx1-2P42580 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nkx1-2P42580 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nkx1-2P42580 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nkx1-2P42580 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nkx1-2P42580 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Nkx1-2P42580 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nkx1-2P42580 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nkx1-2P42580 Gm6018-201ENSMUST00000216090 1306 ntBASIC17.25■□□□□ 0.35
Nkx1-2P42580 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC17.25■□□□□ 0.35
Nkx1-2P42580 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nkx1-2P42580 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nkx1-2P42580 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nkx1-2P42580 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nkx1-2P42580 Gm9109-201ENSMUST00000120254 1405 ntBASIC17.25■□□□□ 0.35
Nkx1-2P42580 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Nkx1-2P42580 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Nkx1-2P42580 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nkx1-2P42580 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nkx1-2P42580 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Nkx1-2P42580 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Nkx1-2P42580 Gm29310-201ENSMUST00000185468 696 ntBASIC17.25■□□□□ 0.35
Nkx1-2P42580 Gm21825-201ENSMUST00000185728 696 ntBASIC17.25■□□□□ 0.35
Nkx1-2P42580 Gm29109-201ENSMUST00000185895 696 ntBASIC17.25■□□□□ 0.35
Nkx1-2P42580 Gm21896-201ENSMUST00000186520 696 ntBASIC17.25■□□□□ 0.35
Nkx1-2P42580 Gm21873-201ENSMUST00000186728 696 ntBASIC17.25■□□□□ 0.35
Nkx1-2P42580 Gm21794-201ENSMUST00000187056 696 ntBASIC17.25■□□□□ 0.35
Nkx1-2P42580 Gm21880-201ENSMUST00000187275 696 ntBASIC17.25■□□□□ 0.35
Nkx1-2P42580 Gm21826-201ENSMUST00000187451 696 ntBASIC17.25■□□□□ 0.35
Nkx1-2P42580 Gm8000-201ENSMUST00000188378 592 ntBASIC17.25■□□□□ 0.35
Nkx1-2P42580 Gm21198-201ENSMUST00000188393 696 ntBASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms