Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Slc6a1P31648 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Slc6a1P31648 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Slc6a1P31648 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Slc6a1P31648 Gm15358-201ENSMUST00000119249 520 ntBASIC12.1□□□□□ -0.47
Slc6a1P31648 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC12.1□□□□□ -0.47
Slc6a1P31648 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Slc6a1P31648 Gm9726-201ENSMUST00000180321 678 ntBASIC12.1□□□□□ -0.47
Slc6a1P31648 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Slc6a1P31648 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Slc6a1P31648 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Slc6a1P31648 Psmb5-202ENSMUST00000227257 622 ntBASIC12.1□□□□□ -0.47
Slc6a1P31648 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Slc6a1P31648 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Slc6a1P31648 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Slc6a1P31648 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Slc6a1P31648 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Slc6a1P31648 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Slc6a1P31648 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Slc6a1P31648 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Slc6a1P31648 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC12.1□□□□□ -0.47
Slc6a1P31648 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Slc6a1P31648 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Slc6a1P31648 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Slc6a1P31648 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Slc6a1P31648 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Slc6a1P31648 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Slc6a1P31648 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Slc6a1P31648 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Slc6a1P31648 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Slc6a1P31648 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Slc6a1P31648 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Slc6a1P31648 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Slc6a1P31648 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Slc6a1P31648 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Slc6a1P31648 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Slc6a1P31648 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Slc6a1P31648 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Slc6a1P31648 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Slc6a1P31648 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Slc6a1P31648 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Slc6a1P31648 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Slc6a1P31648 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Slc6a1P31648 Gm8749-201ENSMUST00000117737 331 ntBASIC12.09□□□□□ -0.47
Slc6a1P31648 Gm6184-201ENSMUST00000120403 1261 ntBASIC12.09□□□□□ -0.47
Slc6a1P31648 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC12.09□□□□□ -0.47
Slc6a1P31648 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Slc6a1P31648 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC12.09□□□□□ -0.47
Slc6a1P31648 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Slc6a1P31648 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Slc6a1P31648 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Slc6a1P31648 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Slc6a1P31648 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Slc6a1P31648 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Slc6a1P31648 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Slc6a1P31648 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Slc6a1P31648 Gm42480-201ENSMUST00000198434 2595 ntBASIC12.09□□□□□ -0.47
Slc6a1P31648 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Slc6a1P31648 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Slc6a1P31648 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Slc6a1P31648 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Slc6a1P31648 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Slc6a1P31648 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.47
Slc6a1P31648 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Slc6a1P31648 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC12.08□□□□□ -0.47
Slc6a1P31648 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Slc6a1P31648 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Slc6a1P31648 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Slc6a1P31648 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
Slc6a1P31648 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Slc6a1P31648 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Slc6a1P31648 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Slc6a1P31648 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Slc6a1P31648 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Slc6a1P31648 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Slc6a1P31648 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Slc6a1P31648 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Slc6a1P31648 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Slc6a1P31648 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC12.08□□□□□ -0.48
Slc6a1P31648 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC12.08□□□□□ -0.48
Slc6a1P31648 Gm8000-201ENSMUST00000188378 592 ntBASIC12.08□□□□□ -0.48
Slc6a1P31648 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC12.08□□□□□ -0.48
Slc6a1P31648 AC084391.1-201ENSMUST00000200651 141 ntBASIC12.08□□□□□ -0.48
Slc6a1P31648 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Slc6a1P31648 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Slc6a1P31648 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Slc6a1P31648 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC12.08□□□□□ -0.48
Slc6a1P31648 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Slc6a1P31648 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Slc6a1P31648 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Slc6a1P31648 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC12.08□□□□□ -0.48
Slc6a1P31648 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Slc6a1P31648 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Slc6a1P31648 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Slc6a1P31648 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Slc6a1P31648 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Slc6a1P31648 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Slc6a1P31648 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Slc6a1P31648 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC12.08□□□□□ -0.48
Slc6a1P31648 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms