Protein–RNA interactions for Protein: P28704

Rxrb, Retinoic acid receptor RXR-beta, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrbP28704 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
RxrbP28704 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
RxrbP28704 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RxrbP28704 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC14.12□□□□□ -0.15
RxrbP28704 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
RxrbP28704 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
RxrbP28704 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RxrbP28704 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
RxrbP28704 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
RxrbP28704 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RxrbP28704 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RxrbP28704 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RxrbP28704 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RxrbP28704 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
RxrbP28704 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RxrbP28704 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RxrbP28704 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
RxrbP28704 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
RxrbP28704 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
RxrbP28704 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC14.11□□□□□ -0.15
RxrbP28704 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RxrbP28704 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
RxrbP28704 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC14.11□□□□□ -0.15
RxrbP28704 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RxrbP28704 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC14.11□□□□□ -0.15
RxrbP28704 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
RxrbP28704 Gm45098-201ENSMUST00000207179 657 ntBASIC14.11□□□□□ -0.15
RxrbP28704 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RxrbP28704 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RxrbP28704 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RxrbP28704 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RxrbP28704 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RxrbP28704 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
RxrbP28704 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RxrbP28704 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
RxrbP28704 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RxrbP28704 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
RxrbP28704 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RxrbP28704 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
RxrbP28704 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC14.11□□□□□ -0.15
RxrbP28704 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RxrbP28704 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC14.11□□□□□ -0.15
RxrbP28704 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
RxrbP28704 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RxrbP28704 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
RxrbP28704 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
RxrbP28704 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RxrbP28704 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RxrbP28704 Gm42829-201ENSMUST00000198417 2585 ntBASIC14.1□□□□□ -0.15
RxrbP28704 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RxrbP28704 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
RxrbP28704 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RxrbP28704 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC14.1□□□□□ -0.15
RxrbP28704 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC14.1□□□□□ -0.15
RxrbP28704 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RxrbP28704 Gm2445-201ENSMUST00000182798 989 ntBASIC14.1□□□□□ -0.15
RxrbP28704 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC14.1□□□□□ -0.15
RxrbP28704 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC14.1□□□□□ -0.15
RxrbP28704 Gm44487-201ENSMUST00000205145 325 ntBASIC14.1□□□□□ -0.15
RxrbP28704 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
RxrbP28704 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC14.1□□□□□ -0.15
RxrbP28704 Gm10154-201ENSMUST00000084445 354 ntBASIC14.1□□□□□ -0.15
RxrbP28704 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RxrbP28704 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RxrbP28704 Gm9347-201ENSMUST00000211473 1607 ntBASIC14.1□□□□□ -0.15
RxrbP28704 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
RxrbP28704 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RxrbP28704 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
RxrbP28704 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RxrbP28704 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RxrbP28704 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
RxrbP28704 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RxrbP28704 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RxrbP28704 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
RxrbP28704 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
RxrbP28704 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
RxrbP28704 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
RxrbP28704 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
RxrbP28704 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RxrbP28704 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC14.1□□□□□ -0.15
RxrbP28704 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RxrbP28704 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
RxrbP28704 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RxrbP28704 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
RxrbP28704 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
RxrbP28704 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
RxrbP28704 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
RxrbP28704 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
RxrbP28704 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RxrbP28704 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC14.09□□□□□ -0.15
RxrbP28704 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
RxrbP28704 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RxrbP28704 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
RxrbP28704 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RxrbP28704 Gm10327-201ENSMUST00000105222 1002 ntBASIC14.09□□□□□ -0.15
RxrbP28704 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RxrbP28704 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
RxrbP28704 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
RxrbP28704 Gm5069-202ENSMUST00000192714 1011 ntBASIC14.09□□□□□ -0.15
RxrbP28704 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms