Protein–RNA interactions for Protein: P10493

Nid1, Nidogen-1, mousemouse

Predictions only

Length 1,245 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nid1P10493 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nid1P10493 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Nid1P10493 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nid1P10493 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Nid1P10493 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Nid1P10493 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC13.18□□□□□ -0.3
Nid1P10493 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nid1P10493 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Nid1P10493 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Nid1P10493 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Nid1P10493 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC13.18□□□□□ -0.3
Nid1P10493 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Nid1P10493 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC13.18□□□□□ -0.3
Nid1P10493 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC13.18□□□□□ -0.3
Nid1P10493 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Nid1P10493 CT943659.1-201ENSMUST00000215459 326 ntBASIC13.18□□□□□ -0.3
Nid1P10493 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nid1P10493 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC13.18□□□□□ -0.3
Nid1P10493 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Nid1P10493 Gm5648-201ENSMUST00000122244 1587 ntBASIC13.18□□□□□ -0.3
Nid1P10493 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nid1P10493 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nid1P10493 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nid1P10493 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
Nid1P10493 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Nid1P10493 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nid1P10493 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nid1P10493 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Nid1P10493 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
Nid1P10493 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Nid1P10493 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nid1P10493 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nid1P10493 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nid1P10493 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nid1P10493 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nid1P10493 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Nid1P10493 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Nid1P10493 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Nid1P10493 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nid1P10493 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Nid1P10493 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC13.17□□□□□ -0.3
Nid1P10493 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC13.17□□□□□ -0.3
Nid1P10493 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Nid1P10493 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Nid1P10493 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC13.17□□□□□ -0.3
Nid1P10493 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Nid1P10493 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Nid1P10493 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC13.17□□□□□ -0.3
Nid1P10493 Gm43073-201ENSMUST00000198200 1189 ntBASIC13.17□□□□□ -0.3
Nid1P10493 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nid1P10493 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nid1P10493 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Nid1P10493 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Nid1P10493 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nid1P10493 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nid1P10493 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Nid1P10493 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nid1P10493 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nid1P10493 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nid1P10493 Gm37133-201ENSMUST00000192705 1922 ntBASIC13.17□□□□□ -0.3
Nid1P10493 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nid1P10493 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nid1P10493 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nid1P10493 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nid1P10493 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nid1P10493 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC13.16□□□□□ -0.3
Nid1P10493 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nid1P10493 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
Nid1P10493 Gm30238-201ENSMUST00000195528 2603 ntBASIC13.16□□□□□ -0.3
Nid1P10493 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nid1P10493 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Nid1P10493 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Nid1P10493 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nid1P10493 CT030684.3-201ENSMUST00000227308 2445 ntBASIC13.16□□□□□ -0.3
Nid1P10493 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC13.16□□□□□ -0.3
Nid1P10493 Gm12428-201ENSMUST00000119844 727 ntBASIC13.16□□□□□ -0.3
Nid1P10493 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC13.16□□□□□ -0.3
Nid1P10493 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC13.16□□□□□ -0.3
Nid1P10493 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
Nid1P10493 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC13.16□□□□□ -0.3
Nid1P10493 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Nid1P10493 Gm16476-201ENSMUST00000221544 139 ntBASIC13.16□□□□□ -0.3
Nid1P10493 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nid1P10493 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Nid1P10493 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC13.16□□□□□ -0.3
Nid1P10493 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC13.16□□□□□ -0.3
Nid1P10493 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Nid1P10493 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Nid1P10493 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Nid1P10493 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nid1P10493 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nid1P10493 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nid1P10493 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nid1P10493 Gm45667-201ENSMUST00000210380 1316 ntBASIC13.15□□□□□ -0.3
Nid1P10493 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nid1P10493 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nid1P10493 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nid1P10493 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC13.15□□□□□ -0.3
Nid1P10493 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC13.15□□□□□ -0.3
Nid1P10493 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms