Protein–RNA interactions for Protein: P04940

Ig kappa chain V-VI region NQ2-17.4.1, mousemouse

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04940 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
P04940 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
P04940 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC11.39□□□□□ -0.59
P04940 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
P04940 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
P04940 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC11.39□□□□□ -0.59
P04940 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC11.39□□□□□ -0.59
P04940 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC11.39□□□□□ -0.59
P04940 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC11.39□□□□□ -0.59
P04940 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
P04940 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
P04940 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
P04940 Gm27618-201ENSMUST00000183671 60 ntBASIC11.39□□□□□ -0.59
P04940 Gm37277-201ENSMUST00000194052 1111 ntBASIC11.39□□□□□ -0.59
P04940 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC11.39□□□□□ -0.59
P04940 Gm44719-201ENSMUST00000206404 149 ntBASIC11.39□□□□□ -0.59
P04940 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC11.39□□□□□ -0.59
P04940 Gm46209-201ENSMUST00000217912 553 ntBASIC11.39□□□□□ -0.59
P04940 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
P04940 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
P04940 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
P04940 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
P04940 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC11.39□□□□□ -0.59
P04940 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC11.39□□□□□ -0.59
P04940 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
P04940 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
P04940 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC11.39□□□□□ -0.59
P04940 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
P04940 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
P04940 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC11.39□□□□□ -0.59
P04940 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
P04940 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC11.39□□□□□ -0.59
P04940 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC11.39□□□□□ -0.59
P04940 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
P04940 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC11.38□□□□□ -0.59
P04940 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
P04940 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
P04940 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
P04940 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
P04940 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
P04940 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
P04940 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
P04940 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
P04940 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
P04940 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
P04940 Gm14767-201ENSMUST00000121559 586 ntBASIC11.38□□□□□ -0.59
P04940 Gm27321-201ENSMUST00000185021 205 ntBASIC11.38□□□□□ -0.59
P04940 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
P04940 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
P04940 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
P04940 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
P04940 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
P04940 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
P04940 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
P04940 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
P04940 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
P04940 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
P04940 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC11.38□□□□□ -0.59
P04940 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
P04940 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
P04940 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
P04940 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC11.38□□□□□ -0.59
P04940 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
P04940 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
P04940 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
P04940 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
P04940 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
P04940 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
P04940 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
P04940 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
P04940 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
P04940 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
P04940 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
P04940 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC11.37□□□□□ -0.59
P04940 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
P04940 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC11.37□□□□□ -0.59
P04940 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
P04940 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
P04940 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
P04940 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
P04940 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
P04940 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
P04940 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
P04940 Gm13616-201ENSMUST00000120600 222 ntBASIC11.37□□□□□ -0.59
P04940 Gm21470-201ENSMUST00000187680 696 ntBASIC11.37□□□□□ -0.59
P04940 Ighv1-51-201ENSMUST00000192903 354 ntBASIC11.37□□□□□ -0.59
P04940 Gm44344-201ENSMUST00000200287 129 ntBASIC11.37□□□□□ -0.59
P04940 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
P04940 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
P04940 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
P04940 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
P04940 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC11.37□□□□□ -0.59
P04940 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
P04940 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
P04940 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
P04940 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
P04940 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
P04940 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
P04940 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
P04940 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms