Protein–RNA interactions for Protein: P04104

Krt1, Keratin, type II cytoskeletal 1, mousemouse

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt1P04104 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Krt1P04104 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Krt1P04104 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Krt1P04104 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Krt1P04104 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Krt1P04104 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Krt1P04104 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Krt1P04104 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC13.27□□□□□ -0.29
Krt1P04104 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Krt1P04104 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Krt1P04104 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Krt1P04104 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Krt1P04104 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC13.27□□□□□ -0.29
Krt1P04104 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Krt1P04104 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Krt1P04104 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Krt1P04104 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Krt1P04104 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Krt1P04104 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Krt1P04104 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Krt1P04104 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Krt1P04104 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Krt1P04104 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Krt1P04104 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Krt1P04104 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Krt1P04104 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Krt1P04104 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Krt1P04104 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Krt1P04104 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC13.26□□□□□ -0.29
Krt1P04104 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Krt1P04104 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Krt1P04104 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Krt1P04104 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Krt1P04104 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Krt1P04104 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Krt1P04104 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Krt1P04104 Gm15372-201ENSMUST00000120729 834 ntBASIC13.26□□□□□ -0.29
Krt1P04104 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
Krt1P04104 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Krt1P04104 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC13.26□□□□□ -0.29
Krt1P04104 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Krt1P04104 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC13.26□□□□□ -0.29
Krt1P04104 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Krt1P04104 Tcf21-202ENSMUST00000218002 1788 ntBASIC13.26□□□□□ -0.29
Krt1P04104 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC13.26□□□□□ -0.29
Krt1P04104 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Krt1P04104 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Krt1P04104 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
Krt1P04104 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Krt1P04104 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Krt1P04104 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Krt1P04104 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Krt1P04104 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Krt1P04104 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Krt1P04104 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Krt1P04104 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Krt1P04104 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Krt1P04104 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Krt1P04104 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Krt1P04104 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Krt1P04104 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Krt1P04104 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Krt1P04104 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Krt1P04104 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Krt1P04104 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Krt1P04104 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Krt1P04104 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Krt1P04104 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Krt1P04104 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Krt1P04104 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC13.25□□□□□ -0.29
Krt1P04104 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Krt1P04104 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Krt1P04104 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Krt1P04104 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Krt1P04104 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Krt1P04104 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Krt1P04104 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Krt1P04104 Gm37153-201ENSMUST00000193637 231 ntBASIC13.25□□□□□ -0.29
Krt1P04104 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Krt1P04104 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Krt1P04104 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Krt1P04104 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Krt1P04104 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Krt1P04104 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Krt1P04104 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Krt1P04104 Gm12020-201ENSMUST00000119030 2042 ntBASIC13.25□□□□□ -0.29
Krt1P04104 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Krt1P04104 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Krt1P04104 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Krt1P04104 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Krt1P04104 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Krt1P04104 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Krt1P04104 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Krt1P04104 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Krt1P04104 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Krt1P04104 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Krt1P04104 Ntrk2-204ENSMUST00000224259 3049 ntBASIC13.24□□□□□ -0.29
Krt1P04104 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Krt1P04104 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC13.24□□□□□ -0.29
Krt1P04104 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 85.6 ms