Protein–RNA interactions for Protein: O35973

Per1, Period circadian protein homolog 1, mousemouse

Predictions only

Length 1,291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Per1O35973 AC155286.1-201ENSMUST00000218632 448 ntBASIC15.19■□□□□ 0.02
Per1O35973 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Per1O35973 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Per1O35973 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Per1O35973 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Per1O35973 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Per1O35973 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Per1O35973 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Per1O35973 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Per1O35973 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Per1O35973 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Per1O35973 Sorbs3-204ENSMUST00000227929 2460 ntBASIC15.19■□□□□ 0.02
Per1O35973 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Per1O35973 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Per1O35973 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Per1O35973 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC15.18■□□□□ 0.02
Per1O35973 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Per1O35973 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
Per1O35973 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Per1O35973 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Per1O35973 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Per1O35973 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Per1O35973 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Per1O35973 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Per1O35973 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
Per1O35973 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Per1O35973 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Per1O35973 Gm8515-201ENSMUST00000194852 576 ntBASIC15.18■□□□□ 0.02
Per1O35973 AC156560.2-201ENSMUST00000221232 264 ntBASIC15.18■□□□□ 0.02
Per1O35973 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Per1O35973 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC15.18■□□□□ 0.02
Per1O35973 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Per1O35973 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Per1O35973 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Per1O35973 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC15.18■□□□□ 0.02
Per1O35973 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Per1O35973 Gm38058-201ENSMUST00000194323 4368 ntBASIC15.18■□□□□ 0.02
Per1O35973 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Per1O35973 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Per1O35973 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Per1O35973 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Per1O35973 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Per1O35973 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
Per1O35973 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Per1O35973 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Per1O35973 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Per1O35973 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC15.17■□□□□ 0.02
Per1O35973 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Per1O35973 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
Per1O35973 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Per1O35973 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Per1O35973 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Per1O35973 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Per1O35973 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Per1O35973 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Per1O35973 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Per1O35973 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Per1O35973 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Per1O35973 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Per1O35973 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC15.17■□□□□ 0.02
Per1O35973 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC15.17■□□□□ 0.02
Per1O35973 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Per1O35973 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC15.17■□□□□ 0.02
Per1O35973 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC15.17■□□□□ 0.02
Per1O35973 Gm9794-201ENSMUST00000202370 423 ntBASIC15.17■□□□□ 0.02
Per1O35973 AC192088.1-201ENSMUST00000227561 301 ntBASIC15.17■□□□□ 0.02
Per1O35973 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Per1O35973 Gm24447-201ENSMUST00000083977 338 ntBASIC15.17■□□□□ 0.02
Per1O35973 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Per1O35973 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC15.17■□□□□ 0.02
Per1O35973 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC15.17■□□□□ 0.02
Per1O35973 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Per1O35973 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC15.17■□□□□ 0.02
Per1O35973 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Per1O35973 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Per1O35973 AC161252.3-201ENSMUST00000225465 1549 ntBASIC15.17■□□□□ 0.02
Per1O35973 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC15.17■□□□□ 0.02
Per1O35973 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Per1O35973 Gm9115-201ENSMUST00000120192 1348 ntBASIC15.17■□□□□ 0.02
Per1O35973 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Per1O35973 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Per1O35973 Ap5m1-205ENSMUST00000227431 3757 ntBASIC15.16■□□□□ 0.02
Per1O35973 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Per1O35973 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Per1O35973 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Per1O35973 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Per1O35973 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Per1O35973 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Per1O35973 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Per1O35973 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Per1O35973 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Per1O35973 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC15.16■□□□□ 0.02
Per1O35973 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC15.16■□□□□ 0.02
Per1O35973 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Per1O35973 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Per1O35973 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Per1O35973 Gm18934-201ENSMUST00000216671 1044 ntBASIC15.16■□□□□ 0.02
Per1O35973 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Per1O35973 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC15.16■□□□□ 0.02
Per1O35973 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms