Protein–RNA interactions for Protein: O35638

Stag2, Cohesin subunit SA-2, mousemouse

Predictions only

Length 1,231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag2O35638 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Stag2O35638 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC16.08■□□□□ 0.16
Stag2O35638 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC16.07■□□□□ 0.16
Stag2O35638 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Stag2O35638 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Stag2O35638 Gm12020-201ENSMUST00000119030 2042 ntBASIC16.07■□□□□ 0.16
Stag2O35638 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Stag2O35638 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Stag2O35638 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Stag2O35638 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Stag2O35638 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Stag2O35638 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Stag2O35638 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
Stag2O35638 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Stag2O35638 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Stag2O35638 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Stag2O35638 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC16.07■□□□□ 0.16
Stag2O35638 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
Stag2O35638 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC16.07■□□□□ 0.16
Stag2O35638 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Stag2O35638 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Stag2O35638 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Stag2O35638 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Stag2O35638 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Stag2O35638 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Stag2O35638 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Stag2O35638 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC16.07■□□□□ 0.16
Stag2O35638 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Stag2O35638 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Stag2O35638 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Stag2O35638 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
Stag2O35638 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Stag2O35638 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
Stag2O35638 Gm45605-201ENSMUST00000210265 4269 ntBASIC16.07■□□□□ 0.16
Stag2O35638 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Stag2O35638 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Stag2O35638 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Stag2O35638 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC16.06■□□□□ 0.16
Stag2O35638 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Stag2O35638 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC16.06■□□□□ 0.16
Stag2O35638 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Stag2O35638 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC16.06■□□□□ 0.16
Stag2O35638 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Stag2O35638 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Stag2O35638 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Stag2O35638 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC16.06■□□□□ 0.16
Stag2O35638 Gm15240-201ENSMUST00000118156 720 ntBASIC16.06■□□□□ 0.16
Stag2O35638 Gm11557-201ENSMUST00000120200 1008 ntBASIC16.06■□□□□ 0.16
Stag2O35638 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC16.06■□□□□ 0.16
Stag2O35638 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC16.06■□□□□ 0.16
Stag2O35638 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Stag2O35638 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Stag2O35638 Gm8927-201ENSMUST00000181978 981 ntBASIC16.06■□□□□ 0.16
Stag2O35638 Ighv1-51-201ENSMUST00000192903 354 ntBASIC16.06■□□□□ 0.16
Stag2O35638 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC16.06■□□□□ 0.16
Stag2O35638 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC16.06■□□□□ 0.16
Stag2O35638 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC16.06■□□□□ 0.16
Stag2O35638 Gm3222-201ENSMUST00000071282 990 ntBASIC16.06■□□□□ 0.16
Stag2O35638 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
Stag2O35638 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Stag2O35638 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Stag2O35638 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Stag2O35638 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC16.06■□□□□ 0.16
Stag2O35638 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Stag2O35638 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Stag2O35638 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Stag2O35638 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Stag2O35638 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Stag2O35638 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Stag2O35638 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Stag2O35638 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC16.05■□□□□ 0.16
Stag2O35638 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Stag2O35638 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Stag2O35638 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Stag2O35638 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Stag2O35638 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC16.05■□□□□ 0.16
Stag2O35638 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Stag2O35638 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC16.05■□□□□ 0.16
Stag2O35638 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Stag2O35638 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC16.05■□□□□ 0.16
Stag2O35638 AC139580.1-202ENSMUST00000223574 928 ntBASIC16.05■□□□□ 0.16
Stag2O35638 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Stag2O35638 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC16.05■□□□□ 0.16
Stag2O35638 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Stag2O35638 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Stag2O35638 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Stag2O35638 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Stag2O35638 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Stag2O35638 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
Stag2O35638 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Stag2O35638 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Stag2O35638 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Stag2O35638 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC16.04■□□□□ 0.16
Stag2O35638 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Stag2O35638 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Stag2O35638 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Stag2O35638 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Stag2O35638 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Stag2O35638 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Stag2O35638 Gm13385-201ENSMUST00000121089 220 ntBASIC16.04■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 70.5 ms