Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Alx4O35137 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC12.53□□□□□ -0.4
Alx4O35137 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Alx4O35137 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Alx4O35137 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Alx4O35137 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Alx4O35137 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Alx4O35137 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Alx4O35137 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Alx4O35137 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Alx4O35137 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Alx4O35137 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Alx4O35137 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Alx4O35137 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Alx4O35137 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Alx4O35137 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Alx4O35137 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC12.53□□□□□ -0.4
Alx4O35137 Gm13884-201ENSMUST00000118103 829 ntBASIC12.53□□□□□ -0.4
Alx4O35137 Gm11543-201ENSMUST00000120758 370 ntBASIC12.53□□□□□ -0.4
Alx4O35137 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC12.53□□□□□ -0.4
Alx4O35137 Mir5131-201ENSMUST00000175426 93 ntBASIC12.53□□□□□ -0.4
Alx4O35137 Gm28659-201ENSMUST00000188013 759 ntBASIC12.53□□□□□ -0.4
Alx4O35137 Gm9449-201ENSMUST00000207265 1011 ntBASIC12.53□□□□□ -0.4
Alx4O35137 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC12.53□□□□□ -0.4
Alx4O35137 AC159295.1-201ENSMUST00000225326 940 ntBASIC12.53□□□□□ -0.4
Alx4O35137 AC139350.3-201ENSMUST00000226151 420 ntBASIC12.53□□□□□ -0.4
Alx4O35137 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Alx4O35137 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Alx4O35137 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Alx4O35137 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Alx4O35137 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Alx4O35137 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Alx4O35137 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Alx4O35137 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Alx4O35137 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Alx4O35137 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Alx4O35137 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Alx4O35137 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Alx4O35137 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Alx4O35137 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Alx4O35137 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Alx4O35137 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Alx4O35137 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Alx4O35137 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Alx4O35137 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Alx4O35137 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Alx4O35137 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Alx4O35137 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Alx4O35137 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC12.52□□□□□ -0.4
Alx4O35137 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Alx4O35137 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Alx4O35137 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Alx4O35137 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Alx4O35137 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Alx4O35137 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Alx4O35137 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Alx4O35137 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Alx4O35137 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Alx4O35137 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Alx4O35137 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Alx4O35137 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Alx4O35137 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC12.52□□□□□ -0.41
Alx4O35137 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Alx4O35137 Rpph1-201ENSMUST00000175096 319 ntBASIC12.52□□□□□ -0.41
Alx4O35137 Gm44719-201ENSMUST00000206404 149 ntBASIC12.52□□□□□ -0.41
Alx4O35137 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC12.52□□□□□ -0.41
Alx4O35137 AC154572.2-201ENSMUST00000225105 997 ntBASIC12.52□□□□□ -0.41
Alx4O35137 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Alx4O35137 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Alx4O35137 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Alx4O35137 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Alx4O35137 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Alx4O35137 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Alx4O35137 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Alx4O35137 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Alx4O35137 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Alx4O35137 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Alx4O35137 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Alx4O35137 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC12.52□□□□□ -0.41
Alx4O35137 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Alx4O35137 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Alx4O35137 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
Alx4O35137 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC12.52□□□□□ -0.41
Alx4O35137 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC12.52□□□□□ -0.41
Alx4O35137 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Alx4O35137 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Alx4O35137 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Alx4O35137 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Alx4O35137 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Alx4O35137 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
Alx4O35137 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Alx4O35137 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Alx4O35137 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Alx4O35137 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Alx4O35137 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Alx4O35137 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Alx4O35137 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC12.51□□□□□ -0.41
Alx4O35137 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Alx4O35137 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Alx4O35137 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms