Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Gm7820-201ENSMUST00000121012 1052 ntBASIC11.9□□□□□ -0.5
Cpsf4lE9Q2N0 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC11.9□□□□□ -0.5
Cpsf4lE9Q2N0 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cpsf4lE9Q2N0 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
Cpsf4lE9Q2N0 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cpsf4lE9Q2N0 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC11.9□□□□□ -0.5
Cpsf4lE9Q2N0 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cpsf4lE9Q2N0 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cpsf4lE9Q2N0 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC11.9□□□□□ -0.5
Cpsf4lE9Q2N0 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cpsf4lE9Q2N0 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cpsf4lE9Q2N0 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cpsf4lE9Q2N0 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cpsf4lE9Q2N0 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Cpsf4lE9Q2N0 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cpsf4lE9Q2N0 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC11.9□□□□□ -0.5
Cpsf4lE9Q2N0 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cpsf4lE9Q2N0 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cpsf4lE9Q2N0 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cpsf4lE9Q2N0 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cpsf4lE9Q2N0 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cpsf4lE9Q2N0 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cpsf4lE9Q2N0 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Cpsf4lE9Q2N0 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cpsf4lE9Q2N0 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.5
Cpsf4lE9Q2N0 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Cpsf4lE9Q2N0 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Cpsf4lE9Q2N0 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.51
Cpsf4lE9Q2N0 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.51
Cpsf4lE9Q2N0 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cpsf4lE9Q2N0 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cpsf4lE9Q2N0 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cpsf4lE9Q2N0 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cpsf4lE9Q2N0 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cpsf4lE9Q2N0 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cpsf4lE9Q2N0 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC11.89□□□□□ -0.51
Cpsf4lE9Q2N0 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cpsf4lE9Q2N0 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC11.89□□□□□ -0.51
Cpsf4lE9Q2N0 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Cpsf4lE9Q2N0 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Cpsf4lE9Q2N0 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cpsf4lE9Q2N0 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
Cpsf4lE9Q2N0 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cpsf4lE9Q2N0 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cpsf4lE9Q2N0 Pcgf5-211ENSMUST00000225920 6443 ntBASIC11.89□□□□□ -0.51
Cpsf4lE9Q2N0 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cpsf4lE9Q2N0 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC11.89□□□□□ -0.51
Cpsf4lE9Q2N0 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Cpsf4lE9Q2N0 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cpsf4lE9Q2N0 Gm3436-201ENSMUST00000179930 840 ntBASIC11.89□□□□□ -0.51
Cpsf4lE9Q2N0 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC11.89□□□□□ -0.51
Cpsf4lE9Q2N0 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cpsf4lE9Q2N0 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Cpsf4lE9Q2N0 AC153872.1-201ENSMUST00000199539 128 ntBASIC11.89□□□□□ -0.51
Cpsf4lE9Q2N0 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Cpsf4lE9Q2N0 AC159114.1-201ENSMUST00000220349 266 ntBASIC11.89□□□□□ -0.51
Cpsf4lE9Q2N0 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cpsf4lE9Q2N0 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cpsf4lE9Q2N0 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cpsf4lE9Q2N0 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cpsf4lE9Q2N0 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cpsf4lE9Q2N0 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cpsf4lE9Q2N0 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cpsf4lE9Q2N0 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Cpsf4lE9Q2N0 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cpsf4lE9Q2N0 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cpsf4lE9Q2N0 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cpsf4lE9Q2N0 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC11.89□□□□□ -0.51
Cpsf4lE9Q2N0 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cpsf4lE9Q2N0 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cpsf4lE9Q2N0 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cpsf4lE9Q2N0 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC11.89□□□□□ -0.51
Cpsf4lE9Q2N0 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Cpsf4lE9Q2N0 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cpsf4lE9Q2N0 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cpsf4lE9Q2N0 AC114543.1-201ENSMUST00000226451 1558 ntBASIC11.88□□□□□ -0.51
Cpsf4lE9Q2N0 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC11.88□□□□□ -0.51
Cpsf4lE9Q2N0 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cpsf4lE9Q2N0 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC11.88□□□□□ -0.51
Cpsf4lE9Q2N0 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC11.88□□□□□ -0.51
Cpsf4lE9Q2N0 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC11.88□□□□□ -0.51
Cpsf4lE9Q2N0 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cpsf4lE9Q2N0 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cpsf4lE9Q2N0 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cpsf4lE9Q2N0 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC11.88□□□□□ -0.51
Cpsf4lE9Q2N0 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cpsf4lE9Q2N0 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cpsf4lE9Q2N0 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cpsf4lE9Q2N0 Gm27989-201ENSMUST00000184721 107 ntBASIC11.88□□□□□ -0.51
Cpsf4lE9Q2N0 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC11.88□□□□□ -0.51
Cpsf4lE9Q2N0 Gm21470-201ENSMUST00000187680 696 ntBASIC11.88□□□□□ -0.51
Cpsf4lE9Q2N0 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cpsf4lE9Q2N0 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Cpsf4lE9Q2N0 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cpsf4lE9Q2N0 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Cpsf4lE9Q2N0 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cpsf4lE9Q2N0 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cpsf4lE9Q2N0 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cpsf4lE9Q2N0 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cpsf4lE9Q2N0 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms