Protein–RNA interactions for Protein: A0A1B0GSB3

Gm3880, Predicted pseudogene 3880, mousemouse

Predictions only

Length 72 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3880A0A1B0GSB3 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
Gm3880A0A1B0GSB3 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Gm3880A0A1B0GSB3 Pcdhb19-201ENSMUST00000059571 7138 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
Gm3880A0A1B0GSB3 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Gm3880A0A1B0GSB3 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Gm3880A0A1B0GSB3 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Gm3880A0A1B0GSB3 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Gm3880A0A1B0GSB3 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Gm3880A0A1B0GSB3 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC6.84□□□□□ -1.31
Gm3880A0A1B0GSB3 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Gm3880A0A1B0GSB3 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
Gm3880A0A1B0GSB3 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
Gm3880A0A1B0GSB3 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Gm3880A0A1B0GSB3 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Gm3880A0A1B0GSB3 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Gm3880A0A1B0GSB3 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
Gm3880A0A1B0GSB3 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
Gm3880A0A1B0GSB3 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC6.84□□□□□ -1.31
Gm3880A0A1B0GSB3 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Gm3880A0A1B0GSB3 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC6.84□□□□□ -1.31
Gm3880A0A1B0GSB3 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
Gm3880A0A1B0GSB3 Gm13234-201ENSMUST00000120010 747 ntBASIC6.84□□□□□ -1.31
Gm3880A0A1B0GSB3 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC6.84□□□□□ -1.31
Gm3880A0A1B0GSB3 Gm15847-201ENSMUST00000121417 1065 ntBASIC6.84□□□□□ -1.31
Gm3880A0A1B0GSB3 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC6.84□□□□□ -1.31
Gm3880A0A1B0GSB3 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Gm3880A0A1B0GSB3 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC6.84□□□□□ -1.31
Gm3880A0A1B0GSB3 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Gm3880A0A1B0GSB3 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Gm3880A0A1B0GSB3 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC6.84□□□□□ -1.31
Gm3880A0A1B0GSB3 Gm7291-201ENSMUST00000199147 382 ntBASIC6.84□□□□□ -1.31
Gm3880A0A1B0GSB3 Gm44549-201ENSMUST00000208351 577 ntBASIC6.84□□□□□ -1.31
Gm3880A0A1B0GSB3 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
Gm3880A0A1B0GSB3 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Gm3880A0A1B0GSB3 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Gm3880A0A1B0GSB3 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
Gm3880A0A1B0GSB3 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Gm3880A0A1B0GSB3 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Gm3880A0A1B0GSB3 Gm43051-201ENSMUST00000201096 2678 ntBASIC6.84□□□□□ -1.31
Gm3880A0A1B0GSB3 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
Gm3880A0A1B0GSB3 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC6.84□□□□□ -1.31
Gm3880A0A1B0GSB3 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Gm3880A0A1B0GSB3 Vcan-202ENSMUST00000109544 5702 ntTSL 5 BASIC6.84□□□□□ -1.31
Gm3880A0A1B0GSB3 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC6.84□□□□□ -1.31
Gm3880A0A1B0GSB3 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Gm3880A0A1B0GSB3 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
Gm3880A0A1B0GSB3 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Gm3880A0A1B0GSB3 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Gm3880A0A1B0GSB3 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC6.84□□□□□ -1.31
Gm3880A0A1B0GSB3 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC6.84□□□□□ -1.31
Gm3880A0A1B0GSB3 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Gm3880A0A1B0GSB3 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.32
Gm3880A0A1B0GSB3 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
Gm3880A0A1B0GSB3 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.32
Gm3880A0A1B0GSB3 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
Gm3880A0A1B0GSB3 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
Gm3880A0A1B0GSB3 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
Gm3880A0A1B0GSB3 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Gm3880A0A1B0GSB3 Apc-203ENSMUST00000115781 12346 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
Gm3880A0A1B0GSB3 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
Gm3880A0A1B0GSB3 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Gm3880A0A1B0GSB3 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Gm3880A0A1B0GSB3 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
Gm3880A0A1B0GSB3 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Gm3880A0A1B0GSB3 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Gm3880A0A1B0GSB3 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC6.83□□□□□ -1.32
Gm3880A0A1B0GSB3 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
Gm3880A0A1B0GSB3 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Gm3880A0A1B0GSB3 Arhgef10-202ENSMUST00000110800 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
Gm3880A0A1B0GSB3 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Gm3880A0A1B0GSB3 Siglec1-203ENSMUST00000110227 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
Gm3880A0A1B0GSB3 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Gm3880A0A1B0GSB3 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Gm3880A0A1B0GSB3 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Gm3880A0A1B0GSB3 Madd-204ENSMUST00000077941 5990 ntAPPRIS ALT2 TSL 2 BASIC6.83□□□□□ -1.32
Gm3880A0A1B0GSB3 Madd-205ENSMUST00000099723 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
Gm3880A0A1B0GSB3 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Gm3880A0A1B0GSB3 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Gm3880A0A1B0GSB3 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Gm3880A0A1B0GSB3 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC6.83□□□□□ -1.32
Gm3880A0A1B0GSB3 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Gm3880A0A1B0GSB3 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Gm3880A0A1B0GSB3 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Gm3880A0A1B0GSB3 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Gm3880A0A1B0GSB3 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Gm3880A0A1B0GSB3 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Gm3880A0A1B0GSB3 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Gm3880A0A1B0GSB3 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Gm3880A0A1B0GSB3 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Gm3880A0A1B0GSB3 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Gm3880A0A1B0GSB3 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC6.83□□□□□ -1.32
Gm3880A0A1B0GSB3 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Gm3880A0A1B0GSB3 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Gm3880A0A1B0GSB3 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC6.83□□□□□ -1.32
Gm3880A0A1B0GSB3 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Gm3880A0A1B0GSB3 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC6.83□□□□□ -1.32
Gm3880A0A1B0GSB3 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Gm3880A0A1B0GSB3 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
Gm3880A0A1B0GSB3 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Gm3880A0A1B0GSB3 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms