Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Gm11873-201ENSMUST00000117877 1304 ntBASIC9.69□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC9.69□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC9.69□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Trav13d-4A0A0G2JFX3 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Trav13d-4A0A0G2JFX3 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Gm45098-201ENSMUST00000207179 657 ntBASIC9.69□□□□□ -0.86
Trav13d-4A0A0G2JFX3 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Ntrk2-209ENSMUST00000225950 2640 ntBASIC9.69□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC9.69□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC9.69□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Gm42928-201ENSMUST00000197338 3339 ntBASIC9.69□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Gm5639-201ENSMUST00000122305 2403 ntBASIC9.68□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Pbld1-202ENSMUST00000178684 2404 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC9.68□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC9.68□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav13d-4A0A0G2JFX3 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Gm16198-201ENSMUST00000118766 670 ntBASIC9.68□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC9.68□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC9.68□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC9.68□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav13d-4A0A0G2JFX3 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Gm10819-201ENSMUST00000099988 561 ntBASIC9.68□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC9.68□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC9.68□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC9.68□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC9.68□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Trav13d-4A0A0G2JFX3 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms