Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
H2afb2S4R1M3 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
H2afb2S4R1M3 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
H2afb2S4R1M3 Mir449b-201ENSMUST00000104833 80 ntBASIC14.09□□□□□ -0.15
H2afb2S4R1M3 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
H2afb2S4R1M3 Gm26308-201ENSMUST00000157768 69 ntBASIC14.09□□□□□ -0.15
H2afb2S4R1M3 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
H2afb2S4R1M3 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC14.09□□□□□ -0.15
H2afb2S4R1M3 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC14.09□□□□□ -0.15
H2afb2S4R1M3 AC139350.3-201ENSMUST00000226151 420 ntBASIC14.09□□□□□ -0.15
H2afb2S4R1M3 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
H2afb2S4R1M3 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
H2afb2S4R1M3 Gm13517-201ENSMUST00000120782 1495 ntBASIC14.09□□□□□ -0.15
H2afb2S4R1M3 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
H2afb2S4R1M3 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
H2afb2S4R1M3 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
H2afb2S4R1M3 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
H2afb2S4R1M3 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
H2afb2S4R1M3 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
H2afb2S4R1M3 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
H2afb2S4R1M3 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
H2afb2S4R1M3 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC14.09□□□□□ -0.15
H2afb2S4R1M3 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC14.09□□□□□ -0.15
H2afb2S4R1M3 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
H2afb2S4R1M3 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
H2afb2S4R1M3 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
H2afb2S4R1M3 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
H2afb2S4R1M3 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
H2afb2S4R1M3 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.15
H2afb2S4R1M3 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
H2afb2S4R1M3 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
H2afb2S4R1M3 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
H2afb2S4R1M3 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC14.08□□□□□ -0.16
H2afb2S4R1M3 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
H2afb2S4R1M3 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
H2afb2S4R1M3 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
H2afb2S4R1M3 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
H2afb2S4R1M3 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
H2afb2S4R1M3 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
H2afb2S4R1M3 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
H2afb2S4R1M3 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC14.08□□□□□ -0.16
H2afb2S4R1M3 Gm23935-201ENSMUST00000102303 57 ntBASIC14.08□□□□□ -0.16
H2afb2S4R1M3 Gm24270-201ENSMUST00000102326 57 ntBASIC14.08□□□□□ -0.16
H2afb2S4R1M3 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
H2afb2S4R1M3 Gm24245-201ENSMUST00000157318 57 ntBASIC14.08□□□□□ -0.16
H2afb2S4R1M3 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
H2afb2S4R1M3 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
H2afb2S4R1M3 Gm8396-201ENSMUST00000057361 823 ntBASIC14.08□□□□□ -0.16
H2afb2S4R1M3 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
H2afb2S4R1M3 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
H2afb2S4R1M3 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
H2afb2S4R1M3 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
H2afb2S4R1M3 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
H2afb2S4R1M3 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
H2afb2S4R1M3 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
H2afb2S4R1M3 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
H2afb2S4R1M3 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
H2afb2S4R1M3 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
H2afb2S4R1M3 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
H2afb2S4R1M3 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
H2afb2S4R1M3 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
H2afb2S4R1M3 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
H2afb2S4R1M3 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
H2afb2S4R1M3 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
H2afb2S4R1M3 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC14.07□□□□□ -0.16
H2afb2S4R1M3 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
H2afb2S4R1M3 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC14.07□□□□□ -0.16
H2afb2S4R1M3 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
H2afb2S4R1M3 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
H2afb2S4R1M3 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
H2afb2S4R1M3 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
H2afb2S4R1M3 Gm6415-201ENSMUST00000118488 348 ntBASIC14.07□□□□□ -0.16
H2afb2S4R1M3 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
H2afb2S4R1M3 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
H2afb2S4R1M3 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC14.07□□□□□ -0.16
H2afb2S4R1M3 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
H2afb2S4R1M3 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC14.07□□□□□ -0.16
H2afb2S4R1M3 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
H2afb2S4R1M3 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
H2afb2S4R1M3 Dupd1-202ENSMUST00000224735 548 ntBASIC14.07□□□□□ -0.16
H2afb2S4R1M3 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
H2afb2S4R1M3 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
H2afb2S4R1M3 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
H2afb2S4R1M3 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
H2afb2S4R1M3 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
H2afb2S4R1M3 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
H2afb2S4R1M3 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
H2afb2S4R1M3 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
H2afb2S4R1M3 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
H2afb2S4R1M3 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
H2afb2S4R1M3 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
H2afb2S4R1M3 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
H2afb2S4R1M3 Gm45779-201ENSMUST00000212189 4064 ntBASIC14.07□□□□□ -0.16
H2afb2S4R1M3 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
H2afb2S4R1M3 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
H2afb2S4R1M3 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
H2afb2S4R1M3 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
H2afb2S4R1M3 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
H2afb2S4R1M3 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
H2afb2S4R1M3 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms