Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC16.64■□□□□ 0.25
PCDHGA3Q9Y5H0 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC16.64■□□□□ 0.25
PCDHGA3Q9Y5H0 AC019129.2-201ENST00000609837 1235 ntBASIC16.64■□□□□ 0.25
PCDHGA3Q9Y5H0 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC16.64■□□□□ 0.25
PCDHGA3Q9Y5H0 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGA3Q9Y5H0 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
PCDHGA3Q9Y5H0 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGA3Q9Y5H0 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGA3Q9Y5H0 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGA3Q9Y5H0 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
PCDHGA3Q9Y5H0 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.64■□□□□ 0.25
PCDHGA3Q9Y5H0 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGA3Q9Y5H0 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGA3Q9Y5H0 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGA3Q9Y5H0 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.64■□□□□ 0.25
PCDHGA3Q9Y5H0 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGA3Q9Y5H0 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC16.63■□□□□ 0.25
PCDHGA3Q9Y5H0 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGA3Q9Y5H0 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
PCDHGA3Q9Y5H0 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGA3Q9Y5H0 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.63■□□□□ 0.25
PCDHGA3Q9Y5H0 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC16.63■□□□□ 0.25
PCDHGA3Q9Y5H0 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGA3Q9Y5H0 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGA3Q9Y5H0 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGA3Q9Y5H0 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGA3Q9Y5H0 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGA3Q9Y5H0 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGA3Q9Y5H0 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGA3Q9Y5H0 AC108073.2-201ENST00000464002 357 ntBASIC16.63■□□□□ 0.25
PCDHGA3Q9Y5H0 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC16.63■□□□□ 0.25
PCDHGA3Q9Y5H0 RPS15P9-201ENST00000494093 319 ntBASIC16.63■□□□□ 0.25
PCDHGA3Q9Y5H0 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGA3Q9Y5H0 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC16.63■□□□□ 0.25
PCDHGA3Q9Y5H0 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC16.63■□□□□ 0.25
PCDHGA3Q9Y5H0 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.63■□□□□ 0.25
PCDHGA3Q9Y5H0 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.63■□□□□ 0.25
PCDHGA3Q9Y5H0 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGA3Q9Y5H0 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16.63■□□□□ 0.25
PCDHGA3Q9Y5H0 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGA3Q9Y5H0 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGA3Q9Y5H0 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.63■□□□□ 0.25
PCDHGA3Q9Y5H0 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGA3Q9Y5H0 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGA3Q9Y5H0 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGA3Q9Y5H0 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.63■□□□□ 0.25
PCDHGA3Q9Y5H0 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGA3Q9Y5H0 OR6D1P-202ENST00000641007 5290 ntBASIC16.63■□□□□ 0.25
PCDHGA3Q9Y5H0 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGA3Q9Y5H0 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGA3Q9Y5H0 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGA3Q9Y5H0 REXO1L9P-201ENST00000604264 2108 ntBASIC16.63■□□□□ 0.25
PCDHGA3Q9Y5H0 AC148477.5-201ENST00000625164 1645 ntBASIC16.63■□□□□ 0.25
PCDHGA3Q9Y5H0 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGA3Q9Y5H0 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHGA3Q9Y5H0 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHGA3Q9Y5H0 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHGA3Q9Y5H0 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
PCDHGA3Q9Y5H0 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHGA3Q9Y5H0 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHGA3Q9Y5H0 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHGA3Q9Y5H0 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.62■□□□□ 0.25
PCDHGA3Q9Y5H0 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHGA3Q9Y5H0 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHGA3Q9Y5H0 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
PCDHGA3Q9Y5H0 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHGA3Q9Y5H0 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHGA3Q9Y5H0 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHGA3Q9Y5H0 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHGA3Q9Y5H0 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHGA3Q9Y5H0 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHGA3Q9Y5H0 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC16.62■□□□□ 0.25
PCDHGA3Q9Y5H0 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC16.62■□□□□ 0.25
PCDHGA3Q9Y5H0 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC16.62■□□□□ 0.25
PCDHGA3Q9Y5H0 HCG4B-203ENST00000450128 991 ntBASIC16.62■□□□□ 0.25
PCDHGA3Q9Y5H0 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHGA3Q9Y5H0 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC16.62■□□□□ 0.25
PCDHGA3Q9Y5H0 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC16.62■□□□□ 0.25
PCDHGA3Q9Y5H0 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC16.62■□□□□ 0.25
PCDHGA3Q9Y5H0 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHGA3Q9Y5H0 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHGA3Q9Y5H0 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHGA3Q9Y5H0 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHGA3Q9Y5H0 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
PCDHGA3Q9Y5H0 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.62■□□□□ 0.25
PCDHGA3Q9Y5H0 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
PCDHGA3Q9Y5H0 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHGA3Q9Y5H0 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHGA3Q9Y5H0 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHGA3Q9Y5H0 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.62■□□□□ 0.25
PCDHGA3Q9Y5H0 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHGA3Q9Y5H0 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHGA3Q9Y5H0 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHGA3Q9Y5H0 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGA3Q9Y5H0 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGA3Q9Y5H0 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGA3Q9Y5H0 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGA3Q9Y5H0 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGA3Q9Y5H0 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGA3Q9Y5H0 FLJ13224-201ENST00000313737 1514 ntBASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms