Protein–RNA interactions for Protein: Q9R1Q9

Atp6ap1, V-type proton ATPase subunit S1, mousemouse

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6ap1Q9R1Q9 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
Atp6ap1Q9R1Q9 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC13.79□□□□□ -0.2
Atp6ap1Q9R1Q9 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Atp6ap1Q9R1Q9 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Atp6ap1Q9R1Q9 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Atp6ap1Q9R1Q9 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Atp6ap1Q9R1Q9 Gm27618-201ENSMUST00000183671 60 ntBASIC13.79□□□□□ -0.2
Atp6ap1Q9R1Q9 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC13.79□□□□□ -0.2
Atp6ap1Q9R1Q9 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC13.79□□□□□ -0.2
Atp6ap1Q9R1Q9 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC13.79□□□□□ -0.2
Atp6ap1Q9R1Q9 Shd-206ENSMUST00000225145 998 ntBASIC13.79□□□□□ -0.2
Atp6ap1Q9R1Q9 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Atp6ap1Q9R1Q9 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Atp6ap1Q9R1Q9 AC115735.4-201ENSMUST00000227460 1944 ntBASIC13.79□□□□□ -0.2
Atp6ap1Q9R1Q9 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Atp6ap1Q9R1Q9 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Atp6ap1Q9R1Q9 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC13.79□□□□□ -0.2
Atp6ap1Q9R1Q9 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC13.79□□□□□ -0.2
Atp6ap1Q9R1Q9 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC13.79□□□□□ -0.2
Atp6ap1Q9R1Q9 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Atp6ap1Q9R1Q9 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Atp6ap1Q9R1Q9 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Atp6ap1Q9R1Q9 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Atp6ap1Q9R1Q9 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Atp6ap1Q9R1Q9 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Atp6ap1Q9R1Q9 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Atp6ap1Q9R1Q9 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Atp6ap1Q9R1Q9 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Atp6ap1Q9R1Q9 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC13.79□□□□□ -0.2
Atp6ap1Q9R1Q9 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Atp6ap1Q9R1Q9 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Atp6ap1Q9R1Q9 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Atp6ap1Q9R1Q9 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Atp6ap1Q9R1Q9 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Atp6ap1Q9R1Q9 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Atp6ap1Q9R1Q9 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Atp6ap1Q9R1Q9 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Atp6ap1Q9R1Q9 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Atp6ap1Q9R1Q9 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Atp6ap1Q9R1Q9 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Atp6ap1Q9R1Q9 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Atp6ap1Q9R1Q9 Gm15653-201ENSMUST00000119247 907 ntBASIC13.78□□□□□ -0.2
Atp6ap1Q9R1Q9 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Atp6ap1Q9R1Q9 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Atp6ap1Q9R1Q9 Gm17837-201ENSMUST00000186435 985 ntBASIC13.78□□□□□ -0.2
Atp6ap1Q9R1Q9 Ighv1-25-201ENSMUST00000195638 345 ntBASIC13.78□□□□□ -0.2
Atp6ap1Q9R1Q9 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC13.78□□□□□ -0.2
Atp6ap1Q9R1Q9 Gm6916-202ENSMUST00000205523 195 ntBASIC13.78□□□□□ -0.2
Atp6ap1Q9R1Q9 Rbfox2-208ENSMUST00000227930 1218 ntBASIC13.78□□□□□ -0.2
Atp6ap1Q9R1Q9 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Atp6ap1Q9R1Q9 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Atp6ap1Q9R1Q9 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Atp6ap1Q9R1Q9 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Atp6ap1Q9R1Q9 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Atp6ap1Q9R1Q9 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Atp6ap1Q9R1Q9 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Atp6ap1Q9R1Q9 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Atp6ap1Q9R1Q9 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Atp6ap1Q9R1Q9 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Atp6ap1Q9R1Q9 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Atp6ap1Q9R1Q9 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Atp6ap1Q9R1Q9 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC13.78□□□□□ -0.2
Atp6ap1Q9R1Q9 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Atp6ap1Q9R1Q9 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Atp6ap1Q9R1Q9 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Atp6ap1Q9R1Q9 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Atp6ap1Q9R1Q9 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Atp6ap1Q9R1Q9 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Atp6ap1Q9R1Q9 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.2
Atp6ap1Q9R1Q9 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
Atp6ap1Q9R1Q9 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Atp6ap1Q9R1Q9 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Atp6ap1Q9R1Q9 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Atp6ap1Q9R1Q9 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Atp6ap1Q9R1Q9 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Atp6ap1Q9R1Q9 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Atp6ap1Q9R1Q9 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Atp6ap1Q9R1Q9 Mir6956-201ENSMUST00000183598 62 ntBASIC13.77□□□□□ -0.21
Atp6ap1Q9R1Q9 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC13.77□□□□□ -0.21
Atp6ap1Q9R1Q9 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Atp6ap1Q9R1Q9 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Atp6ap1Q9R1Q9 Gm45667-201ENSMUST00000210380 1316 ntBASIC13.77□□□□□ -0.21
Atp6ap1Q9R1Q9 Gm6888-201ENSMUST00000221983 706 ntBASIC13.77□□□□□ -0.21
Atp6ap1Q9R1Q9 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Atp6ap1Q9R1Q9 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Atp6ap1Q9R1Q9 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Atp6ap1Q9R1Q9 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Atp6ap1Q9R1Q9 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
Atp6ap1Q9R1Q9 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Atp6ap1Q9R1Q9 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Atp6ap1Q9R1Q9 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Atp6ap1Q9R1Q9 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Atp6ap1Q9R1Q9 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Atp6ap1Q9R1Q9 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Atp6ap1Q9R1Q9 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Atp6ap1Q9R1Q9 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Atp6ap1Q9R1Q9 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Atp6ap1Q9R1Q9 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Atp6ap1Q9R1Q9 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Atp6ap1Q9R1Q9 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms