Protein–RNA interactions for Protein: Q9R061

Nubp2, Cytosolic Fe-S cluster assembly factor NUBP2, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp2Q9R061 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nubp2Q9R061 Gm28182-201ENSMUST00000188354 2477 ntBASIC12.54□□□□□ -0.4
Nubp2Q9R061 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Nubp2Q9R061 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nubp2Q9R061 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Nubp2Q9R061 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nubp2Q9R061 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Nubp2Q9R061 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Nubp2Q9R061 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nubp2Q9R061 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nubp2Q9R061 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nubp2Q9R061 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nubp2Q9R061 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC12.53□□□□□ -0.4
Nubp2Q9R061 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Nubp2Q9R061 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nubp2Q9R061 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Nubp2Q9R061 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC12.53□□□□□ -0.4
Nubp2Q9R061 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nubp2Q9R061 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nubp2Q9R061 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nubp2Q9R061 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC12.53□□□□□ -0.4
Nubp2Q9R061 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nubp2Q9R061 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Nubp2Q9R061 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Nubp2Q9R061 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nubp2Q9R061 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC12.53□□□□□ -0.4
Nubp2Q9R061 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Nubp2Q9R061 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nubp2Q9R061 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Nubp2Q9R061 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC12.53□□□□□ -0.4
Nubp2Q9R061 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nubp2Q9R061 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Nubp2Q9R061 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC12.53□□□□□ -0.4
Nubp2Q9R061 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
Nubp2Q9R061 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
Nubp2Q9R061 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Nubp2Q9R061 Gm22175-201ENSMUST00000175007 78 ntBASIC12.53□□□□□ -0.4
Nubp2Q9R061 Gm27920-201ENSMUST00000183953 96 ntBASIC12.53□□□□□ -0.4
Nubp2Q9R061 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Nubp2Q9R061 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC12.53□□□□□ -0.4
Nubp2Q9R061 Gm12500-202ENSMUST00000186471 2428 ntBASIC12.53□□□□□ -0.4
Nubp2Q9R061 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nubp2Q9R061 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC12.53□□□□□ -0.4
Nubp2Q9R061 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Nubp2Q9R061 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Nubp2Q9R061 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nubp2Q9R061 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nubp2Q9R061 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nubp2Q9R061 Gm4081-201ENSMUST00000195287 1838 ntBASIC12.53□□□□□ -0.4
Nubp2Q9R061 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nubp2Q9R061 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nubp2Q9R061 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Nubp2Q9R061 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Nubp2Q9R061 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Nubp2Q9R061 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC12.52□□□□□ -0.4
Nubp2Q9R061 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.4
Nubp2Q9R061 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Nubp2Q9R061 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Nubp2Q9R061 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Nubp2Q9R061 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.4
Nubp2Q9R061 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Nubp2Q9R061 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC12.52□□□□□ -0.41
Nubp2Q9R061 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC12.52□□□□□ -0.41
Nubp2Q9R061 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Nubp2Q9R061 Gm9824-201ENSMUST00000178707 561 ntBASIC12.52□□□□□ -0.41
Nubp2Q9R061 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nubp2Q9R061 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC12.52□□□□□ -0.41
Nubp2Q9R061 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Nubp2Q9R061 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nubp2Q9R061 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nubp2Q9R061 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC12.52□□□□□ -0.41
Nubp2Q9R061 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC12.52□□□□□ -0.41
Nubp2Q9R061 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nubp2Q9R061 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Nubp2Q9R061 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Nubp2Q9R061 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nubp2Q9R061 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC12.52□□□□□ -0.41
Nubp2Q9R061 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Nubp2Q9R061 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Nubp2Q9R061 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC12.52□□□□□ -0.41
Nubp2Q9R061 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Nubp2Q9R061 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nubp2Q9R061 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nubp2Q9R061 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nubp2Q9R061 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nubp2Q9R061 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nubp2Q9R061 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nubp2Q9R061 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Nubp2Q9R061 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Nubp2Q9R061 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nubp2Q9R061 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nubp2Q9R061 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nubp2Q9R061 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nubp2Q9R061 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Nubp2Q9R061 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
Nubp2Q9R061 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nubp2Q9R061 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC12.51□□□□□ -0.41
Nubp2Q9R061 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Nubp2Q9R061 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nubp2Q9R061 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 78.9 ms