Protein–RNA interactions for Protein: Q9D7F7

Chmp4c, Charged multivesicular body protein 4c, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4cQ9D7F7 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC16.85■□□□□ 0.29
Chmp4cQ9D7F7 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC16.85■□□□□ 0.29
Chmp4cQ9D7F7 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Chmp4cQ9D7F7 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC16.85■□□□□ 0.29
Chmp4cQ9D7F7 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chmp4cQ9D7F7 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chmp4cQ9D7F7 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Chmp4cQ9D7F7 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chmp4cQ9D7F7 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chmp4cQ9D7F7 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC16.85■□□□□ 0.29
Chmp4cQ9D7F7 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chmp4cQ9D7F7 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chmp4cQ9D7F7 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chmp4cQ9D7F7 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chmp4cQ9D7F7 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC16.85■□□□□ 0.29
Chmp4cQ9D7F7 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chmp4cQ9D7F7 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Chmp4cQ9D7F7 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC16.85■□□□□ 0.29
Chmp4cQ9D7F7 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chmp4cQ9D7F7 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chmp4cQ9D7F7 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chmp4cQ9D7F7 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chmp4cQ9D7F7 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chmp4cQ9D7F7 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Chmp4cQ9D7F7 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chmp4cQ9D7F7 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC16.84■□□□□ 0.29
Chmp4cQ9D7F7 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chmp4cQ9D7F7 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chmp4cQ9D7F7 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chmp4cQ9D7F7 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Chmp4cQ9D7F7 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chmp4cQ9D7F7 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chmp4cQ9D7F7 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chmp4cQ9D7F7 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chmp4cQ9D7F7 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chmp4cQ9D7F7 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chmp4cQ9D7F7 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC16.84■□□□□ 0.29
Chmp4cQ9D7F7 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Chmp4cQ9D7F7 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chmp4cQ9D7F7 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chmp4cQ9D7F7 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Chmp4cQ9D7F7 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Chmp4cQ9D7F7 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Chmp4cQ9D7F7 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC16.84■□□□□ 0.29
Chmp4cQ9D7F7 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chmp4cQ9D7F7 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chmp4cQ9D7F7 Gm6018-201ENSMUST00000216090 1306 ntBASIC16.84■□□□□ 0.29
Chmp4cQ9D7F7 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC16.84■□□□□ 0.29
Chmp4cQ9D7F7 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chmp4cQ9D7F7 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chmp4cQ9D7F7 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Chmp4cQ9D7F7 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chmp4cQ9D7F7 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chmp4cQ9D7F7 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Chmp4cQ9D7F7 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Chmp4cQ9D7F7 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC16.84■□□□□ 0.29
Chmp4cQ9D7F7 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Chmp4cQ9D7F7 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Chmp4cQ9D7F7 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Chmp4cQ9D7F7 Gm4913-201ENSMUST00000117075 1290 ntBASIC16.83■□□□□ 0.28
Chmp4cQ9D7F7 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
Chmp4cQ9D7F7 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC16.83■□□□□ 0.28
Chmp4cQ9D7F7 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Chmp4cQ9D7F7 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Chmp4cQ9D7F7 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Chmp4cQ9D7F7 Gm26513-201ENSMUST00000181802 2489 ntBASIC16.83■□□□□ 0.28
Chmp4cQ9D7F7 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Chmp4cQ9D7F7 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Chmp4cQ9D7F7 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC16.83■□□□□ 0.28
Chmp4cQ9D7F7 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Chmp4cQ9D7F7 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Chmp4cQ9D7F7 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Chmp4cQ9D7F7 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Chmp4cQ9D7F7 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Chmp4cQ9D7F7 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Chmp4cQ9D7F7 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Chmp4cQ9D7F7 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Chmp4cQ9D7F7 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chmp4cQ9D7F7 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC16.82■□□□□ 0.28
Chmp4cQ9D7F7 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chmp4cQ9D7F7 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chmp4cQ9D7F7 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chmp4cQ9D7F7 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chmp4cQ9D7F7 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chmp4cQ9D7F7 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chmp4cQ9D7F7 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC16.82■□□□□ 0.28
Chmp4cQ9D7F7 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC16.82■□□□□ 0.28
Chmp4cQ9D7F7 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Chmp4cQ9D7F7 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC16.82■□□□□ 0.28
Chmp4cQ9D7F7 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Chmp4cQ9D7F7 AC102291.3-201ENSMUST00000226566 405 ntBASIC16.82■□□□□ 0.28
Chmp4cQ9D7F7 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Chmp4cQ9D7F7 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chmp4cQ9D7F7 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chmp4cQ9D7F7 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chmp4cQ9D7F7 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chmp4cQ9D7F7 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Chmp4cQ9D7F7 Grk6-205ENSMUST00000224653 2976 ntBASIC16.82■□□□□ 0.28
Chmp4cQ9D7F7 Gm42471-201ENSMUST00000201457 1865 ntBASIC16.82■□□□□ 0.28
Chmp4cQ9D7F7 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms