Protein–RNA interactions for Protein: Q9D0E3

Lysmd1, LysM and putative peptidoglycan-binding domain-containing protein 1, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd1Q9D0E3 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Lysmd1Q9D0E3 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Lysmd1Q9D0E3 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Lysmd1Q9D0E3 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Lysmd1Q9D0E3 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Lysmd1Q9D0E3 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Lysmd1Q9D0E3 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC14.83□□□□□ -0.04
Lysmd1Q9D0E3 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Lysmd1Q9D0E3 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Lysmd1Q9D0E3 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC14.83□□□□□ -0.04
Lysmd1Q9D0E3 AC132901.1-201ENSMUST00000224345 508 ntBASIC14.83□□□□□ -0.04
Lysmd1Q9D0E3 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Lysmd1Q9D0E3 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Lysmd1Q9D0E3 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Lysmd1Q9D0E3 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Lysmd1Q9D0E3 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Lysmd1Q9D0E3 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Lysmd1Q9D0E3 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Lysmd1Q9D0E3 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Lysmd1Q9D0E3 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Lysmd1Q9D0E3 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Lysmd1Q9D0E3 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Lysmd1Q9D0E3 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Lysmd1Q9D0E3 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC14.82□□□□□ -0.04
Lysmd1Q9D0E3 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Lysmd1Q9D0E3 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lysmd1Q9D0E3 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lysmd1Q9D0E3 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Lysmd1Q9D0E3 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Lysmd1Q9D0E3 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Lysmd1Q9D0E3 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Lysmd1Q9D0E3 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lysmd1Q9D0E3 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Lysmd1Q9D0E3 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Lysmd1Q9D0E3 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Lysmd1Q9D0E3 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Lysmd1Q9D0E3 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Lysmd1Q9D0E3 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC14.82□□□□□ -0.04
Lysmd1Q9D0E3 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Lysmd1Q9D0E3 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Lysmd1Q9D0E3 Gm29608-201ENSMUST00000190444 463 ntBASIC14.82□□□□□ -0.04
Lysmd1Q9D0E3 Gm38144-201ENSMUST00000192790 465 ntBASIC14.82□□□□□ -0.04
Lysmd1Q9D0E3 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC14.82□□□□□ -0.04
Lysmd1Q9D0E3 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Lysmd1Q9D0E3 AC159819.2-201ENSMUST00000216151 342 ntBASIC14.82□□□□□ -0.04
Lysmd1Q9D0E3 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lysmd1Q9D0E3 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Lysmd1Q9D0E3 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Lysmd1Q9D0E3 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Lysmd1Q9D0E3 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
Lysmd1Q9D0E3 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lysmd1Q9D0E3 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lysmd1Q9D0E3 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Lysmd1Q9D0E3 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC14.82□□□□□ -0.04
Lysmd1Q9D0E3 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Lysmd1Q9D0E3 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Lysmd1Q9D0E3 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lysmd1Q9D0E3 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lysmd1Q9D0E3 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lysmd1Q9D0E3 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lysmd1Q9D0E3 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lysmd1Q9D0E3 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lysmd1Q9D0E3 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lysmd1Q9D0E3 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lysmd1Q9D0E3 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lysmd1Q9D0E3 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
Lysmd1Q9D0E3 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lysmd1Q9D0E3 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lysmd1Q9D0E3 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Lysmd1Q9D0E3 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Lysmd1Q9D0E3 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lysmd1Q9D0E3 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC14.81□□□□□ -0.04
Lysmd1Q9D0E3 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Lysmd1Q9D0E3 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lysmd1Q9D0E3 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Lysmd1Q9D0E3 Gm44405-201ENSMUST00000198952 126 ntBASIC14.81□□□□□ -0.04
Lysmd1Q9D0E3 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC14.81□□□□□ -0.04
Lysmd1Q9D0E3 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lysmd1Q9D0E3 Ccdc153-201ENSMUST00000092426 1087 ntAPPRIS P2 TSL 2 BASIC14.81□□□□□ -0.04
Lysmd1Q9D0E3 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Lysmd1Q9D0E3 Mir497b-201ENSMUST00000093601 125 ntBASIC14.81□□□□□ -0.04
Lysmd1Q9D0E3 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC14.81□□□□□ -0.04
Lysmd1Q9D0E3 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lysmd1Q9D0E3 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lysmd1Q9D0E3 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lysmd1Q9D0E3 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lysmd1Q9D0E3 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lysmd1Q9D0E3 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC14.81□□□□□ -0.04
Lysmd1Q9D0E3 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lysmd1Q9D0E3 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lysmd1Q9D0E3 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lysmd1Q9D0E3 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lysmd1Q9D0E3 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Lysmd1Q9D0E3 Ntrk2-205ENSMUST00000224402 2284 ntBASIC14.81□□□□□ -0.04
Lysmd1Q9D0E3 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Lysmd1Q9D0E3 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lysmd1Q9D0E3 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lysmd1Q9D0E3 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lysmd1Q9D0E3 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Lysmd1Q9D0E3 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms