Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC16.57■□□□□ 0.24
Col20a1Q923P0 AC132467.2-202ENSMUST00000227726 559 ntBASIC16.57■□□□□ 0.24
Col20a1Q923P0 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col20a1Q923P0 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Col20a1Q923P0 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col20a1Q923P0 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col20a1Q923P0 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Col20a1Q923P0 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Col20a1Q923P0 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Col20a1Q923P0 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Col20a1Q923P0 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col20a1Q923P0 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Col20a1Q923P0 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col20a1Q923P0 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col20a1Q923P0 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col20a1Q923P0 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col20a1Q923P0 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Col20a1Q923P0 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Col20a1Q923P0 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col20a1Q923P0 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col20a1Q923P0 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col20a1Q923P0 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC16.56■□□□□ 0.24
Col20a1Q923P0 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC16.56■□□□□ 0.24
Col20a1Q923P0 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col20a1Q923P0 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC16.56■□□□□ 0.24
Col20a1Q923P0 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col20a1Q923P0 Gm15806-201ENSMUST00000120696 955 ntBASIC16.56■□□□□ 0.24
Col20a1Q923P0 Gm9002-201ENSMUST00000178437 499 ntBASIC16.56■□□□□ 0.24
Col20a1Q923P0 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Col20a1Q923P0 Gm18187-201ENSMUST00000196476 984 ntBASIC16.56■□□□□ 0.24
Col20a1Q923P0 Gm43094-201ENSMUST00000196549 921 ntBASIC16.56■□□□□ 0.24
Col20a1Q923P0 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col20a1Q923P0 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col20a1Q923P0 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col20a1Q923P0 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Col20a1Q923P0 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Col20a1Q923P0 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col20a1Q923P0 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col20a1Q923P0 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col20a1Q923P0 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col20a1Q923P0 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Col20a1Q923P0 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col20a1Q923P0 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col20a1Q923P0 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col20a1Q923P0 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
Col20a1Q923P0 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col20a1Q923P0 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC16.56■□□□□ 0.24
Col20a1Q923P0 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
Col20a1Q923P0 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Col20a1Q923P0 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Col20a1Q923P0 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Col20a1Q923P0 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col20a1Q923P0 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Col20a1Q923P0 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col20a1Q923P0 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Col20a1Q923P0 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC16.55■□□□□ 0.24
Col20a1Q923P0 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col20a1Q923P0 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Col20a1Q923P0 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col20a1Q923P0 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col20a1Q923P0 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col20a1Q923P0 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col20a1Q923P0 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
Col20a1Q923P0 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col20a1Q923P0 Mir698-201ENSMUST00000102164 109 ntBASIC16.55■□□□□ 0.24
Col20a1Q923P0 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col20a1Q923P0 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Col20a1Q923P0 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Col20a1Q923P0 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
Col20a1Q923P0 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC16.55■□□□□ 0.24
Col20a1Q923P0 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC16.55■□□□□ 0.24
Col20a1Q923P0 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC16.55■□□□□ 0.24
Col20a1Q923P0 CT030657.3-201ENSMUST00000222707 1200 ntBASIC16.55■□□□□ 0.24
Col20a1Q923P0 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col20a1Q923P0 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col20a1Q923P0 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col20a1Q923P0 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col20a1Q923P0 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col20a1Q923P0 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Col20a1Q923P0 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC16.55■□□□□ 0.24
Col20a1Q923P0 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Col20a1Q923P0 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Col20a1Q923P0 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col20a1Q923P0 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col20a1Q923P0 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Col20a1Q923P0 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Col20a1Q923P0 Gm45760-201ENSMUST00000212190 1782 ntBASIC16.55■□□□□ 0.24
Col20a1Q923P0 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col20a1Q923P0 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Col20a1Q923P0 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Col20a1Q923P0 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC16.55■□□□□ 0.24
Col20a1Q923P0 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC16.55■□□□□ 0.24
Col20a1Q923P0 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col20a1Q923P0 AC148324.1-201ENSMUST00000219034 4240 ntBASIC16.54■□□□□ 0.24
Col20a1Q923P0 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col20a1Q923P0 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col20a1Q923P0 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col20a1Q923P0 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC16.54■□□□□ 0.24
Col20a1Q923P0 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Col20a1Q923P0 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 62.4 ms