Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdha3Q91Y16 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Pcdha3Q91Y16 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdha3Q91Y16 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdha3Q91Y16 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC14.74□□□□□ -0.05
Pcdha3Q91Y16 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdha3Q91Y16 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdha3Q91Y16 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdha3Q91Y16 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdha3Q91Y16 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdha3Q91Y16 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdha3Q91Y16 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdha3Q91Y16 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdha3Q91Y16 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdha3Q91Y16 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdha3Q91Y16 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdha3Q91Y16 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdha3Q91Y16 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC14.73□□□□□ -0.05
Pcdha3Q91Y16 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdha3Q91Y16 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdha3Q91Y16 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC14.73□□□□□ -0.05
Pcdha3Q91Y16 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdha3Q91Y16 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC14.73□□□□□ -0.05
Pcdha3Q91Y16 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Pcdha3Q91Y16 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdha3Q91Y16 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdha3Q91Y16 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC14.73□□□□□ -0.05
Pcdha3Q91Y16 Gm27533-201ENSMUST00000183800 152 ntBASIC14.73□□□□□ -0.05
Pcdha3Q91Y16 Gm27631-201ENSMUST00000184163 466 ntBASIC14.73□□□□□ -0.05
Pcdha3Q91Y16 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdha3Q91Y16 Gm37277-201ENSMUST00000194052 1111 ntBASIC14.73□□□□□ -0.05
Pcdha3Q91Y16 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC14.73□□□□□ -0.05
Pcdha3Q91Y16 Gm6888-201ENSMUST00000221983 706 ntBASIC14.73□□□□□ -0.05
Pcdha3Q91Y16 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdha3Q91Y16 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdha3Q91Y16 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdha3Q91Y16 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdha3Q91Y16 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdha3Q91Y16 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdha3Q91Y16 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Pcdha3Q91Y16 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdha3Q91Y16 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdha3Q91Y16 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdha3Q91Y16 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdha3Q91Y16 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdha3Q91Y16 Gm38042-201ENSMUST00000191614 5208 ntBASIC14.73□□□□□ -0.05
Pcdha3Q91Y16 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdha3Q91Y16 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdha3Q91Y16 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Pcdha3Q91Y16 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Pcdha3Q91Y16 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdha3Q91Y16 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdha3Q91Y16 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdha3Q91Y16 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdha3Q91Y16 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdha3Q91Y16 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Pcdha3Q91Y16 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdha3Q91Y16 Gm5763-201ENSMUST00000155951 1530 ntBASIC14.72□□□□□ -0.05
Pcdha3Q91Y16 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdha3Q91Y16 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdha3Q91Y16 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdha3Q91Y16 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdha3Q91Y16 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdha3Q91Y16 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdha3Q91Y16 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdha3Q91Y16 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC14.72□□□□□ -0.05
Pcdha3Q91Y16 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdha3Q91Y16 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdha3Q91Y16 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdha3Q91Y16 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdha3Q91Y16 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdha3Q91Y16 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdha3Q91Y16 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdha3Q91Y16 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Pcdha3Q91Y16 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Pcdha3Q91Y16 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdha3Q91Y16 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdha3Q91Y16 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC14.72□□□□□ -0.05
Pcdha3Q91Y16 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdha3Q91Y16 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdha3Q91Y16 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdha3Q91Y16 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdha3Q91Y16 AC121801.1-201ENSMUST00000225363 1899 ntBASIC14.72□□□□□ -0.05
Pcdha3Q91Y16 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdha3Q91Y16 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Pcdha3Q91Y16 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdha3Q91Y16 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdha3Q91Y16 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC14.71□□□□□ -0.05
Pcdha3Q91Y16 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdha3Q91Y16 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdha3Q91Y16 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdha3Q91Y16 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdha3Q91Y16 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdha3Q91Y16 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdha3Q91Y16 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdha3Q91Y16 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdha3Q91Y16 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdha3Q91Y16 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdha3Q91Y16 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdha3Q91Y16 Gm27680-201ENSMUST00000184192 160 ntBASIC14.71□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms