Protein–RNA interactions for Protein: Q91Y10

Pcdhac1, Protocadherin alpha C1, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac1Q91Y10 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhac1Q91Y10 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC13.19□□□□□ -0.3
Pcdhac1Q91Y10 Gm9182-201ENSMUST00000217829 639 ntBASIC13.19□□□□□ -0.3
Pcdhac1Q91Y10 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhac1Q91Y10 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhac1Q91Y10 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhac1Q91Y10 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhac1Q91Y10 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhac1Q91Y10 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhac1Q91Y10 Ssr1-204ENSMUST00000225319 1610 ntBASIC13.19□□□□□ -0.3
Pcdhac1Q91Y10 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Pcdhac1Q91Y10 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhac1Q91Y10 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhac1Q91Y10 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhac1Q91Y10 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhac1Q91Y10 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhac1Q91Y10 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhac1Q91Y10 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhac1Q91Y10 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Pcdhac1Q91Y10 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhac1Q91Y10 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
Pcdhac1Q91Y10 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhac1Q91Y10 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhac1Q91Y10 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC13.19□□□□□ -0.3
Pcdhac1Q91Y10 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhac1Q91Y10 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhac1Q91Y10 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhac1Q91Y10 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhac1Q91Y10 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhac1Q91Y10 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhac1Q91Y10 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhac1Q91Y10 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhac1Q91Y10 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhac1Q91Y10 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhac1Q91Y10 Gm30238-201ENSMUST00000195528 2603 ntBASIC13.18□□□□□ -0.3
Pcdhac1Q91Y10 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Pcdhac1Q91Y10 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhac1Q91Y10 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhac1Q91Y10 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhac1Q91Y10 Mir1895-201ENSMUST00000122615 79 ntBASIC13.18□□□□□ -0.3
Pcdhac1Q91Y10 Gm27494-201ENSMUST00000184735 189 ntBASIC13.18□□□□□ -0.3
Pcdhac1Q91Y10 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC13.18□□□□□ -0.3
Pcdhac1Q91Y10 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC13.18□□□□□ -0.3
Pcdhac1Q91Y10 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhac1Q91Y10 CT030684.1-201ENSMUST00000227292 914 ntBASIC13.18□□□□□ -0.3
Pcdhac1Q91Y10 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhac1Q91Y10 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhac1Q91Y10 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC13.18□□□□□ -0.3
Pcdhac1Q91Y10 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhac1Q91Y10 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhac1Q91Y10 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhac1Q91Y10 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhac1Q91Y10 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhac1Q91Y10 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhac1Q91Y10 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Pcdhac1Q91Y10 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhac1Q91Y10 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhac1Q91Y10 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Pcdhac1Q91Y10 Gm43364-201ENSMUST00000196046 3274 ntBASIC13.18□□□□□ -0.3
Pcdhac1Q91Y10 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhac1Q91Y10 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhac1Q91Y10 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Pcdhac1Q91Y10 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Pcdhac1Q91Y10 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhac1Q91Y10 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhac1Q91Y10 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC13.18□□□□□ -0.3
Pcdhac1Q91Y10 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhac1Q91Y10 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhac1Q91Y10 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Pcdhac1Q91Y10 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhac1Q91Y10 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhac1Q91Y10 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhac1Q91Y10 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhac1Q91Y10 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Pcdhac1Q91Y10 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhac1Q91Y10 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhac1Q91Y10 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhac1Q91Y10 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhac1Q91Y10 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhac1Q91Y10 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhac1Q91Y10 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC13.17□□□□□ -0.3
Pcdhac1Q91Y10 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhac1Q91Y10 Gm20553-201ENSMUST00000204205 844 ntBASIC13.17□□□□□ -0.3
Pcdhac1Q91Y10 Gm45098-201ENSMUST00000207179 657 ntBASIC13.17□□□□□ -0.3
Pcdhac1Q91Y10 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhac1Q91Y10 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhac1Q91Y10 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC13.17□□□□□ -0.3
Pcdhac1Q91Y10 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhac1Q91Y10 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhac1Q91Y10 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhac1Q91Y10 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhac1Q91Y10 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Pcdhac1Q91Y10 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Pcdhac1Q91Y10 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC13.17□□□□□ -0.3
Pcdhac1Q91Y10 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhac1Q91Y10 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhac1Q91Y10 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhac1Q91Y10 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhac1Q91Y10 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhac1Q91Y10 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms