Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Pcdhb6Q91XZ4 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhb6Q91XZ4 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC14.46□□□□□ -0.09
Pcdhb6Q91XZ4 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC14.46□□□□□ -0.09
Pcdhb6Q91XZ4 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Pcdhb6Q91XZ4 Gm27430-201ENSMUST00000184585 107 ntBASIC14.46□□□□□ -0.09
Pcdhb6Q91XZ4 Gm44333-201ENSMUST00000197168 107 ntBASIC14.46□□□□□ -0.09
Pcdhb6Q91XZ4 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
Pcdhb6Q91XZ4 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
Pcdhb6Q91XZ4 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhb6Q91XZ4 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC14.46□□□□□ -0.09
Pcdhb6Q91XZ4 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Pcdhb6Q91XZ4 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhb6Q91XZ4 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhb6Q91XZ4 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Pcdhb6Q91XZ4 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhb6Q91XZ4 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhb6Q91XZ4 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Pcdhb6Q91XZ4 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.1
Pcdhb6Q91XZ4 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Pcdhb6Q91XZ4 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Pcdhb6Q91XZ4 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Pcdhb6Q91XZ4 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Pcdhb6Q91XZ4 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Pcdhb6Q91XZ4 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Pcdhb6Q91XZ4 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC14.46□□□□□ -0.1
Pcdhb6Q91XZ4 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb6Q91XZ4 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb6Q91XZ4 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb6Q91XZ4 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC14.45□□□□□ -0.1
Pcdhb6Q91XZ4 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb6Q91XZ4 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
Pcdhb6Q91XZ4 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb6Q91XZ4 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb6Q91XZ4 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb6Q91XZ4 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC14.45□□□□□ -0.1
Pcdhb6Q91XZ4 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb6Q91XZ4 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
Pcdhb6Q91XZ4 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC14.45□□□□□ -0.1
Pcdhb6Q91XZ4 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb6Q91XZ4 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
Pcdhb6Q91XZ4 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb6Q91XZ4 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Pcdhb6Q91XZ4 Gm22175-201ENSMUST00000175007 78 ntBASIC14.45□□□□□ -0.1
Pcdhb6Q91XZ4 Gm2445-201ENSMUST00000182798 989 ntBASIC14.45□□□□□ -0.1
Pcdhb6Q91XZ4 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC14.45□□□□□ -0.1
Pcdhb6Q91XZ4 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb6Q91XZ4 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb6Q91XZ4 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb6Q91XZ4 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Pcdhb6Q91XZ4 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb6Q91XZ4 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb6Q91XZ4 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb6Q91XZ4 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC14.45□□□□□ -0.1
Pcdhb6Q91XZ4 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb6Q91XZ4 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Pcdhb6Q91XZ4 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
Pcdhb6Q91XZ4 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC14.45□□□□□ -0.1
Pcdhb6Q91XZ4 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb6Q91XZ4 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Pcdhb6Q91XZ4 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Pcdhb6Q91XZ4 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhb6Q91XZ4 AC159196.2-201ENSMUST00000224082 1622 ntBASIC14.44□□□□□ -0.1
Pcdhb6Q91XZ4 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
Pcdhb6Q91XZ4 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhb6Q91XZ4 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Pcdhb6Q91XZ4 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhb6Q91XZ4 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhb6Q91XZ4 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhb6Q91XZ4 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Pcdhb6Q91XZ4 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Pcdhb6Q91XZ4 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
Pcdhb6Q91XZ4 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhb6Q91XZ4 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC14.44□□□□□ -0.1
Pcdhb6Q91XZ4 Gm33320-201ENSMUST00000192232 530 ntBASIC14.44□□□□□ -0.1
Pcdhb6Q91XZ4 Gm37171-201ENSMUST00000192636 1185 ntBASIC14.44□□□□□ -0.1
Pcdhb6Q91XZ4 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC14.44□□□□□ -0.1
Pcdhb6Q91XZ4 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhb6Q91XZ4 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Pcdhb6Q91XZ4 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhb6Q91XZ4 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhb6Q91XZ4 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Pcdhb6Q91XZ4 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhb6Q91XZ4 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhb6Q91XZ4 AC166491.1-201ENSMUST00000227053 2308 ntBASIC14.44□□□□□ -0.1
Pcdhb6Q91XZ4 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhb6Q91XZ4 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhb6Q91XZ4 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhb6Q91XZ4 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Pcdhb6Q91XZ4 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhb6Q91XZ4 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhb6Q91XZ4 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC14.44□□□□□ -0.1
Pcdhb6Q91XZ4 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Pcdhb6Q91XZ4 Ksr1-207ENSMUST00000226282 5260 ntBASIC14.44□□□□□ -0.1
Pcdhb6Q91XZ4 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhb6Q91XZ4 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Pcdhb6Q91XZ4 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
Pcdhb6Q91XZ4 Gm10710-201ENSMUST00000047876 3971 ntBASIC14.43□□□□□ -0.1
Pcdhb6Q91XZ4 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb6Q91XZ4 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms