Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trim60Q8VI40 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim60Q8VI40 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim60Q8VI40 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim60Q8VI40 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim60Q8VI40 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim60Q8VI40 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trim60Q8VI40 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC14.56□□□□□ -0.08
Trim60Q8VI40 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC14.56□□□□□ -0.08
Trim60Q8VI40 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trim60Q8VI40 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim60Q8VI40 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim60Q8VI40 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim60Q8VI40 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trim60Q8VI40 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim60Q8VI40 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim60Q8VI40 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trim60Q8VI40 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim60Q8VI40 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC14.55□□□□□ -0.08
Trim60Q8VI40 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Trim60Q8VI40 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim60Q8VI40 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC14.55□□□□□ -0.08
Trim60Q8VI40 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trim60Q8VI40 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC14.55□□□□□ -0.08
Trim60Q8VI40 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
Trim60Q8VI40 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Trim60Q8VI40 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC14.55□□□□□ -0.08
Trim60Q8VI40 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim60Q8VI40 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trim60Q8VI40 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trim60Q8VI40 Gm45683-201ENSMUST00000210825 1247 ntBASIC14.55□□□□□ -0.08
Trim60Q8VI40 Gm5364-201ENSMUST00000216789 889 ntBASIC14.55□□□□□ -0.08
Trim60Q8VI40 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC14.55□□□□□ -0.08
Trim60Q8VI40 AC131187.1-201ENSMUST00000224567 809 ntBASIC14.55□□□□□ -0.08
Trim60Q8VI40 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim60Q8VI40 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Trim60Q8VI40 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trim60Q8VI40 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim60Q8VI40 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim60Q8VI40 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Trim60Q8VI40 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim60Q8VI40 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trim60Q8VI40 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trim60Q8VI40 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim60Q8VI40 Gm9347-201ENSMUST00000211473 1607 ntBASIC14.55□□□□□ -0.08
Trim60Q8VI40 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim60Q8VI40 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC14.55□□□□□ -0.08
Trim60Q8VI40 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC14.55□□□□□ -0.08
Trim60Q8VI40 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim60Q8VI40 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC14.54□□□□□ -0.08
Trim60Q8VI40 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Trim60Q8VI40 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC14.54□□□□□ -0.08
Trim60Q8VI40 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim60Q8VI40 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim60Q8VI40 CT030684.3-201ENSMUST00000227308 2445 ntBASIC14.54□□□□□ -0.08
Trim60Q8VI40 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim60Q8VI40 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim60Q8VI40 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim60Q8VI40 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trim60Q8VI40 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim60Q8VI40 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC14.54□□□□□ -0.08
Trim60Q8VI40 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim60Q8VI40 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trim60Q8VI40 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trim60Q8VI40 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC14.54□□□□□ -0.08
Trim60Q8VI40 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Trim60Q8VI40 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim60Q8VI40 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim60Q8VI40 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC14.54□□□□□ -0.08
Trim60Q8VI40 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC14.54□□□□□ -0.08
Trim60Q8VI40 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim60Q8VI40 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim60Q8VI40 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trim60Q8VI40 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim60Q8VI40 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim60Q8VI40 Gm12020-201ENSMUST00000119030 2042 ntBASIC14.54□□□□□ -0.08
Trim60Q8VI40 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
Trim60Q8VI40 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim60Q8VI40 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim60Q8VI40 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim60Q8VI40 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim60Q8VI40 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Trim60Q8VI40 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Trim60Q8VI40 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim60Q8VI40 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trim60Q8VI40 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim60Q8VI40 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim60Q8VI40 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim60Q8VI40 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC14.54□□□□□ -0.08
Trim60Q8VI40 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim60Q8VI40 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim60Q8VI40 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim60Q8VI40 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim60Q8VI40 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim60Q8VI40 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim60Q8VI40 Gm37019-201ENSMUST00000192133 2134 ntBASIC14.53□□□□□ -0.08
Trim60Q8VI40 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim60Q8VI40 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim60Q8VI40 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim60Q8VI40 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 84.2 ms