Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Gm16198-201ENSMUST00000118766 670 ntBASIC11.5□□□□□ -0.57
Nup35Q8R4R6 Gm6184-201ENSMUST00000120403 1261 ntBASIC11.5□□□□□ -0.57
Nup35Q8R4R6 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC11.5□□□□□ -0.57
Nup35Q8R4R6 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC11.5□□□□□ -0.57
Nup35Q8R4R6 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC11.5□□□□□ -0.57
Nup35Q8R4R6 Gm34391-201ENSMUST00000203706 907 ntBASIC11.5□□□□□ -0.57
Nup35Q8R4R6 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC11.5□□□□□ -0.57
Nup35Q8R4R6 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Nup35Q8R4R6 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC11.5□□□□□ -0.57
Nup35Q8R4R6 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nup35Q8R4R6 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Nup35Q8R4R6 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nup35Q8R4R6 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nup35Q8R4R6 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nup35Q8R4R6 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nup35Q8R4R6 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Nup35Q8R4R6 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nup35Q8R4R6 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nup35Q8R4R6 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nup35Q8R4R6 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nup35Q8R4R6 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nup35Q8R4R6 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nup35Q8R4R6 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nup35Q8R4R6 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nup35Q8R4R6 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Nup35Q8R4R6 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Nup35Q8R4R6 Gm37644-201ENSMUST00000192190 2270 ntBASIC11.49□□□□□ -0.57
Nup35Q8R4R6 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC11.49□□□□□ -0.57
Nup35Q8R4R6 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nup35Q8R4R6 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Nup35Q8R4R6 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nup35Q8R4R6 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Nup35Q8R4R6 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nup35Q8R4R6 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Nup35Q8R4R6 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nup35Q8R4R6 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC11.49□□□□□ -0.57
Nup35Q8R4R6 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nup35Q8R4R6 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Nup35Q8R4R6 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nup35Q8R4R6 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC11.49□□□□□ -0.57
Nup35Q8R4R6 Gm43332-201ENSMUST00000202511 1044 ntBASIC11.49□□□□□ -0.57
Nup35Q8R4R6 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nup35Q8R4R6 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nup35Q8R4R6 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nup35Q8R4R6 Gm10729-202ENSMUST00000193403 1375 ntBASIC11.49□□□□□ -0.57
Nup35Q8R4R6 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nup35Q8R4R6 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Nup35Q8R4R6 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nup35Q8R4R6 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Nup35Q8R4R6 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nup35Q8R4R6 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nup35Q8R4R6 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nup35Q8R4R6 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Nup35Q8R4R6 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Nup35Q8R4R6 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nup35Q8R4R6 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nup35Q8R4R6 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nup35Q8R4R6 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nup35Q8R4R6 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nup35Q8R4R6 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Nup35Q8R4R6 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nup35Q8R4R6 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nup35Q8R4R6 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nup35Q8R4R6 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nup35Q8R4R6 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC11.48□□□□□ -0.57
Nup35Q8R4R6 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nup35Q8R4R6 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nup35Q8R4R6 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nup35Q8R4R6 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nup35Q8R4R6 Gm7862-201ENSMUST00000121461 292 ntBASIC11.48□□□□□ -0.57
Nup35Q8R4R6 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
Nup35Q8R4R6 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC11.48□□□□□ -0.57
Nup35Q8R4R6 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC11.48□□□□□ -0.57
Nup35Q8R4R6 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nup35Q8R4R6 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC11.48□□□□□ -0.57
Nup35Q8R4R6 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC11.48□□□□□ -0.57
Nup35Q8R4R6 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nup35Q8R4R6 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Nup35Q8R4R6 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nup35Q8R4R6 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC11.48□□□□□ -0.57
Nup35Q8R4R6 AC123645.1-201ENSMUST00000228469 605 ntBASIC11.48□□□□□ -0.57
Nup35Q8R4R6 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nup35Q8R4R6 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nup35Q8R4R6 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Nup35Q8R4R6 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Nup35Q8R4R6 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC11.48□□□□□ -0.57
Nup35Q8R4R6 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Nup35Q8R4R6 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nup35Q8R4R6 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nup35Q8R4R6 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Nup35Q8R4R6 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nup35Q8R4R6 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nup35Q8R4R6 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Nup35Q8R4R6 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nup35Q8R4R6 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC11.48□□□□□ -0.57
Nup35Q8R4R6 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nup35Q8R4R6 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nup35Q8R4R6 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nup35Q8R4R6 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Nup35Q8R4R6 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms