Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ddx54Q8K4L0 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ddx54Q8K4L0 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Ddx54Q8K4L0 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Ddx54Q8K4L0 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ddx54Q8K4L0 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC18.27■□□□□ 0.52
Ddx54Q8K4L0 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC18.27■□□□□ 0.52
Ddx54Q8K4L0 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ddx54Q8K4L0 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Ddx54Q8K4L0 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ddx54Q8K4L0 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ddx54Q8K4L0 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ddx54Q8K4L0 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ddx54Q8K4L0 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ddx54Q8K4L0 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
Ddx54Q8K4L0 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Ddx54Q8K4L0 Gm20628-201ENSMUST00000177363 3215 ntBASIC18.27■□□□□ 0.51
Ddx54Q8K4L0 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Ddx54Q8K4L0 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ddx54Q8K4L0 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ddx54Q8K4L0 Ccdc166-201ENSMUST00000182172 2584 ntBASIC18.26■□□□□ 0.51
Ddx54Q8K4L0 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ddx54Q8K4L0 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Ddx54Q8K4L0 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ddx54Q8K4L0 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC18.26■□□□□ 0.51
Ddx54Q8K4L0 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC18.26■□□□□ 0.51
Ddx54Q8K4L0 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Ddx54Q8K4L0 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ddx54Q8K4L0 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ddx54Q8K4L0 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ddx54Q8K4L0 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ddx54Q8K4L0 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ddx54Q8K4L0 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ddx54Q8K4L0 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ddx54Q8K4L0 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ddx54Q8K4L0 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ddx54Q8K4L0 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ddx54Q8K4L0 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
Ddx54Q8K4L0 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ddx54Q8K4L0 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ddx54Q8K4L0 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ddx54Q8K4L0 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ddx54Q8K4L0 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ddx54Q8K4L0 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ddx54Q8K4L0 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ddx54Q8K4L0 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ddx54Q8K4L0 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ddx54Q8K4L0 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ddx54Q8K4L0 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ddx54Q8K4L0 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC18.25■□□□□ 0.51
Ddx54Q8K4L0 Gm13859-201ENSMUST00000119936 1423 ntBASIC18.25■□□□□ 0.51
Ddx54Q8K4L0 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ddx54Q8K4L0 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ddx54Q8K4L0 AC153366.2-201ENSMUST00000219461 1984 ntBASIC18.25■□□□□ 0.51
Ddx54Q8K4L0 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC18.25■□□□□ 0.51
Ddx54Q8K4L0 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ddx54Q8K4L0 Gm11400-201ENSMUST00000120853 1214 ntBASIC18.25■□□□□ 0.51
Ddx54Q8K4L0 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ddx54Q8K4L0 Mir6979-201ENSMUST00000183927 56 ntBASIC18.25■□□□□ 0.51
Ddx54Q8K4L0 Gm37489-201ENSMUST00000191883 159 ntBASIC18.25■□□□□ 0.51
Ddx54Q8K4L0 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ddx54Q8K4L0 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ddx54Q8K4L0 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ddx54Q8K4L0 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ddx54Q8K4L0 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ddx54Q8K4L0 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ddx54Q8K4L0 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Ddx54Q8K4L0 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ddx54Q8K4L0 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ddx54Q8K4L0 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC18.24■□□□□ 0.51
Ddx54Q8K4L0 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Ddx54Q8K4L0 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Ddx54Q8K4L0 Gm27528-202ENSMUST00000222916 2012 ntBASIC18.24■□□□□ 0.51
Ddx54Q8K4L0 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC18.24■□□□□ 0.51
Ddx54Q8K4L0 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC18.24■□□□□ 0.51
Ddx54Q8K4L0 Gm13297-201ENSMUST00000120205 934 ntBASIC18.24■□□□□ 0.51
Ddx54Q8K4L0 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC18.24■□□□□ 0.51
Ddx54Q8K4L0 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ddx54Q8K4L0 Gm38158-201ENSMUST00000194617 339 ntBASIC18.24■□□□□ 0.51
Ddx54Q8K4L0 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC18.24■□□□□ 0.51
Ddx54Q8K4L0 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC18.24■□□□□ 0.51
Ddx54Q8K4L0 Gm2824-203ENSMUST00000226189 1228 ntBASIC18.24■□□□□ 0.51
Ddx54Q8K4L0 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ddx54Q8K4L0 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Ddx54Q8K4L0 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ddx54Q8K4L0 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ddx54Q8K4L0 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Ddx54Q8K4L0 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ddx54Q8K4L0 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ddx54Q8K4L0 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Ddx54Q8K4L0 AC159196.2-201ENSMUST00000224082 1622 ntBASIC18.23■□□□□ 0.51
Ddx54Q8K4L0 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC18.23■□□□□ 0.51
Ddx54Q8K4L0 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ddx54Q8K4L0 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ddx54Q8K4L0 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ddx54Q8K4L0 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Ddx54Q8K4L0 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ddx54Q8K4L0 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ddx54Q8K4L0 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Ddx54Q8K4L0 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms